Luteibacter aegosomatissinici: L2Y97_04625
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Entry
L2Y97_04625 CDS
T09055
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
laeo
Luteibacter aegosomatissinici
Pathway
laeo02020
Two-component system
laeo02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
laeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
L2Y97_04625
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
L2Y97_04625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
laeo03021
]
L2Y97_04625
Transcription machinery [BR:
laeo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L2Y97_04625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
NUDIX
Relaxase_C
HTH_IclR
HTH_38
Motif
Other DBs
NCBI-ProteinID:
UPG95400
LinkDB
All DBs
Position
complement(1048305..1049786)
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AA seq
493 aa
AA seq
DB search
MKPGLQFRLHQQLTLTPQLQQAIRLLQLSQLELEAELRQIAESNPLLEFAEDAESEADGA
EESTSFDEAMEYRARDEQPVKATREEESTASPSEELAPEWDDDRFHGEAGDYAGGPSRNG
SGDEEGFEPQNAAPESLQQHLEWQLNLSQFTPRDHAIATAIIHVLDEDGYLRDGLDAVQA
ALREFHADLDEIEAVRKRIQRFDPTGIASLDLRDCLLCQLSQFAEETPQRGLAIRIVTDE
IELLARNDTGKIARRLKAAEADVAVAASLIRSLDPRPGAALDATPVEYVAPDVYARRESG
RWKVSLNPDAQPRLGLNQHYCNLIARARGDDATWMKGQLQEARWLLKSLQSRAETLTKVA
EVIVRRQSAFLDYGPEAMHPLVLREVAEEVGMHESTISRVTTRKYMHTPRGTFELKHFFS
SGVATEDGGSASATAIQAMLRKLITAEDPRRPLSDQALAEELHRRGIQVARRTVAKYREA
MRIPSSSERVRAG
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccggacttcagtttcgcctgcatcagcagctcacgctgacgccacagctccag
caggccatccgcctgctccagttgtcgcagctggagcttgaggccgaactccgccagata
gcggaaagtaacccgctgctcgagttcgccgaagatgccgaatccgaagcggatggcgcc
gaggaaagcaccagcttcgacgaggccatggaataccgcgcgcgcgacgagcagcccgtc
aaggccacgcgcgaagaagaatccaccgcatccccttccgaagagctcgctcccgagtgg
gacgacgaccgcttccacggcgaggccggcgattacgcgggcgggccctcgcgcaatggc
agcggcgacgaagaaggcttcgagccgcagaacgccgccccggaaagcctgcagcagcac
ctggagtggcagctcaacctgtcccagttcacgccgcgtgatcacgcgatcgcgaccgcc
atcatccacgtgcttgatgaggacggttacctgcgtgacggcctggacgcggtgcaggcg
gccctgcgggagttccacgccgatctcgacgagatcgaggccgttcgcaagcggatccag
cgtttcgatcccacgggcatcgccagcctggacctgcgtgactgcctgctgtgccagctc
agccagtttgccgaagaaacgccgcagcgcgggctcgccatccgcatcgttaccgatgaa
atcgaactgctggcgcgcaacgacaccggcaagatcgcccggcggctgaaggcggccgag
gccgacgtggcggtggccgcatcgctcatccgcagcctggacccacgccccggcgcggcc
ctggatgccaccccggtggagtacgtcgcacccgatgtctacgcccgccgtgagagcggc
cggtggaaggtaagcctgaacccggatgcgcagccccggctgggcctgaaccagcattac
tgcaacctcatcgcccgcgcccgtggcgatgacgccacctggatgaagggccagctgcag
gaggcccgatggctcctgaagagcctgcaatcccgcgccgaaaccctgaccaaggtggcc
gaggtgatcgtccgccggcagagcgccttcctcgattacggccccgaggccatgcacccg
ctggtgctgcgcgaggtggccgaagaggtgggcatgcacgaatcgaccatttccagggtc
accacgcgcaagtacatgcacacgccgcgcggtaccttcgagctgaagcactttttctcg
agcggcgtggccacggaagacggcggcagcgcgtccgcgacggccatccaggccatgttg
cgcaagctgatcacggcggaagatccgcgtcgcccgctgtccgaccaggccctcgcggag
gaactccatcgacgcggtattcaggtagcccgccgtacggtagccaagtaccgggaagcg
atgcgcatccccagctccagtgaacgcgtgcgcgccggctaa
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