Luteibacter aegosomatissinici: L2Y97_06410
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Entry
L2Y97_06410 CDS
T09055
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
laeo
Luteibacter aegosomatissinici
Pathway
laeo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
laeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
L2Y97_06410 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
laeo03400
]
L2Y97_06410 (recD)
Enzymes [BR:
laeo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
L2Y97_06410 (recD)
DNA repair and recombination proteins [BR:
laeo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
L2Y97_06410 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
AAA_11
Helicase_RecD
Viral_helicase1
SH3_13
AAA_22
UvrD-helicase
SLFN-g3_helicase
AAA_28
nSTAND3
T2SSE
AAA_16
Motif
Other DBs
NCBI-ProteinID:
UPG95737
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All DBs
Position
1454109..1455989
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AA seq
626 aa
AA seq
DB search
MIADIHAWLDEATGNGVLRPMDRAFARFLGTLDPNVDARVLAAAALLSRELADGHICVDI
ATLGEREPGLADAEAWLAGTPLVASPAGDTAAPLVLDGTLLYLRRFWRDEARVAEAILDR
LTPLPDLPGLRGELDRLFASGEKSIDWQKVACAIAVRSAFAVITGGPGTGKTTTVVRLLG
LLQTLAAKGGEPRLRIRLAAPTGKAAARLNASIAAQVAELDVDATVREGIPAEVTTLHRL
LGSRPDTRTFHYNADNPLHLDVLVIDEASMIDLEMMAATFEALPRGARLILLGDKDQLSS
VEAGAVLGDLCARAEAGHYDAGTRAWLREVAGADVEAWTDDASAWRLDQRVTMLRHSRRF
GSDSGIGALATAINQGDARAVATAFDGRFADIARLGATAAGVAALAIDGRGDAPGYRHYL
EWIKANRPAAGAGDDAHAAWGRGALQAYGRFQLLCATRQGDLGVAGQNERIVQGLFERQL
IPAALGGWFEGRPVIVARNDYALGLMNGDIGVTLALPDGQGGNVLRVAFLVMDDTGGERL
RFVTPSRLTAIETVYAMSVHKSQGSEFEHAALALPPEPSPVLTRELVYTGVTRARRHFTL
LAAADILAYAVGRKTKRASGLLGRLG
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgatcgccgacatccatgcctggctcgacgaagccaccggcaacggcgtgttgcggccg
atggaccgtgctttcgcgcgttttcttggcacgcttgacccgaacgtcgatgcgcgcgtc
ctcgctgcggcggcgctgctcagccgcgaacttgccgacgggcatatctgcgtcgatatc
gcgaccctgggagaacgtgagccaggcctcgccgacgccgaagcgtggctcgcgggtacg
cccctggtcgcctcgcccgccggcgacaccgcggcgcccctcgtgcttgatggcacgttg
ctctacctgcgccgcttctggcgtgatgaagcacgcgtggcggaggccattcttgatcgc
ctcacgccgctaccggacctgcccggcctgcgcggcgaactggatcgcctgttcgctagc
ggcgagaagagcatcgactggcagaaggtggcctgcgccatcgccgtgcgcagtgccttt
gccgtgatcacgggcggcccgggcacgggtaagacgaccaccgtcgtgcgcttgctcggt
ttgttgcagaccttggcggcgaagggtggtgaaccacgcctgcgtatccgcctggccgcc
cccacgggcaaggcggcagctcgcctcaacgcatccattgccgcgcaggtggctgagctg
gatgtcgacgcgacggtgcgcgaaggcatcccggcagaggtcacgacgctgcatcgcctg
cttggcagccggcccgacacacgtaccttccattacaacgccgacaacccgttgcatctg
gatgtgctcgtcatcgatgaggcctcgatgatcgatctcgagatgatggccgcgacattc
gaggcgctgccgcggggcgcccggcttatcctgctgggcgacaaggaccagctctcgtcg
gtggaggcgggtgcggtgctcggcgatctctgtgcccgcgccgaagcaggccattacgac
gctgggacgcgtgcgtggcttcgcgaggtggcgggtgccgatgtcgaggcatggacggac
gacgcctcggcgtggcgcctcgaccagcgggtcacgatgcttcgccacagccggcgtttc
ggtagcgatagtggtatcggcgccttggcgaccgcgatcaaccagggcgatgcccgggcg
gtggccacggcgttcgacggccgtttcgccgacatcgcccggcttggggccacggcggca
ggtgtagccgccctcgccatcgatgggcgcggcgacgccccggggtaccggcactacctg
gagtggatcaaggcgaaccggccggccgccggtgccggtgatgacgcccatgccgcgtgg
ggccggggcgcgctgcaagcctacggccggttccagctgctttgcgcgacgcgccagggt
gatcttggcgtagcgggccagaacgagcgcattgtgcagggattgttcgagcggcagctc
attccggcggccctgggtgggtggttcgaggggcggcccgttatcgtggctcgcaacgat
tacgcgctgggcctgatgaacggcgatattggcgtcacgctggcgctgccggacgggcag
ggcggcaacgtgctgcgcgttgcgttcctcgtcatggacgacacgggcggtgaacggctc
cgtttcgtcacacccagccggctcacggccattgaaacggtgtacgccatgtcggtgcac
aaatcgcagggctccgagttcgagcacgcggcgctggccctgccgccggagccctcgccc
gtgcttacccgcgaactggtgtataccggcgtcactcgcgcgcggcgccatttcacgctg
ctggcggcggccgacatcctggcgtatgcggtggggcggaagacgaagcgggcttcgggg
ttgctgggcaggctggggtga
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