Luteibacter aegosomatissinici: L2Y97_15740
Help
Entry
L2Y97_15740 CDS
T09055
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
laeo
Luteibacter aegosomatissinici
Pathway
laeo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
laeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L2Y97_15740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
laeo03019
]
L2Y97_15740
03009 Ribosome biogenesis [BR:
laeo03009
]
L2Y97_15740
Enzymes [BR:
laeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
L2Y97_15740
Messenger RNA biogenesis [BR:
laeo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
L2Y97_15740
Ribosome biogenesis [BR:
laeo03009
]
Prokaryotic type
rRNA helicases
L2Y97_15740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
adh_short
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
UPG93298
LinkDB
All DBs
Position
3493124..3494980
Genome browser
AA seq
618 aa
AA seq
DB search
MTSPDTDNAPALPGFSALALDANVVRALTDVGYETPSPIQAATIPPLLEGRDVIGQAQTG
TGKTAAFALPVLSRIDVKPGKPQALVLAPTRELAIQVAEAFQKYATYMPGFQVLPIYGGQ
SYGPQLQGLKRGAQIVVGTPGRIIDHLDKGTLDLSALKFVVLDEADEMLRMGFIDDVEKL
LQATPEGRQVALFSATMPSPIRRIAQTYLKDPVEITIKNKTTTAANIRQRYWWVSGVHKL
DALTRILEAESFDAMIVFARTKSATEELASKLQARGFAAAAINGDMAQAQRERVIDQLKN
GKLDILIATDVAARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRNGEAILFVTPRE
KNLLRQIERATRQPIEQMQLPTIEAVNDTRVNKFNQRITDTLAAGDLGLFQQLVEKYEQE
HNVPAIEIAAALAKIAQGDQPLLLEPPAKREYSERPPREYDRERPQRDFDRDRGPRDGGD
FNDRRPVREGMRQPRPHATESGKKTYRIEVGHEHGVKPGNIVGAIANEGGVEAKFIGRVS
IRDDYSLIDLPDGMPAETFNHLKKVWVAQQQLKISEWDGTEQPQSGAPPQRPRGNFRPQG
ARSGGPGGGKPPRRKRDY
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgacatcccccgatactgacaacgctccggccctgcccggtttcagcgcgctcgcgctc
gacgctaacgtcgtccgcgccctgaccgatgtgggttacgagaccccttcgccgatccag
gccgccaccatcccgccgctgctcgaaggccgcgacgtgatcggccaggcccagaccggc
accggcaaaaccgcggcgttcgcgctgccggtcctttcgcgcatcgacgtgaagccgggt
aagccgcaggccctggtgcttgcccccacgcgcgagctggccatccaggtggccgaagcg
ttccagaagtacgccacgtacatgccgggcttccaggtcctgccgatctacggcggccag
agctacggcccgcagctgcagggcctgaagcgtggtgcgcagatcgtcgtcggcaccccc
ggccgcatcatcgatcacctggacaagggcaccctggatctttccgccctgaagttcgtg
gtcctcgatgaggccgacgaaatgctgcgcatgggcttcatcgacgatgtcgagaagctg
ctgcaggcgacgccggaaggccgccaggtcgccctgttctccgcgaccatgccgtcgccg
atccgccgtattgcgcagacgtacctgaaggatccggtcgagatcacgatcaagaacaag
accaccaccgcggcgaacatccgccagcgttactggtgggtcagcggcgtgcacaagctc
gatgcgcttacccgcatcctcgaggcggaaagcttcgacgccatgatcgtgttcgcccgc
accaagtcggccacggaagaactcgccagcaagctgcaggcacgtggtttcgcggccgcc
gccatcaatggcgacatggcccaggcccagcgcgagcgcgtgatcgaccagctgaagaac
ggcaagctcgatatcctgatcgccactgacgtggccgcgcgcggcctggacgtggagcgc
atcagccatgtgctgaactacgacatcccgcacgacaccgaatcgtacgtgcaccgcatt
ggccgcaccggccgtgcaggccgtaacggtgaggccatcctgttcgtgacgccgcgcgag
aagaacctgctccgccagatcgagcgcgccacgcgccagccgatcgagcagatgcagctg
ccgaccatcgaggcggtgaacgatacgcgcgtgaacaagttcaaccagcgcatcaccgat
acgctggccgctggcgacctggggctgttccagcagttggtggagaagtacgagcaggag
cacaacgtgccggcgatcgagattgccgccgcgctggccaagatcgcccagggcgaccag
ccgctgctgctcgagccgccggccaagcgcgagtactccgagcgcccgccgcgcgagtac
gatcgtgagcgcccgcagcgcgatttcgatcgcgaccgtggcccgcgtgatggtggcgat
ttcaatgaccgccgcccggtgcgcgagggcatgcgccagccgcgcccgcacgccacggag
tcgggtaagaagacgtaccgcattgaggtgggtcacgagcacggcgtgaagccgggcaat
atcgtgggggcgattgcgaatgagggcggcgtggaagccaagttcatcggccgcgtgagc
attcgcgacgattacagcctgatcgatcttccggatggcatgccggcggagacgttcaac
cacctgaagaaggtgtgggtggcgcagcagcagctgaagatcagcgagtgggatggcacg
gagcagccgcagagcggcgcaccgccgcagcgcccgcgcggtaatttccgcccgcagggt
gcccgctcgggcggcccgggtggcggcaagccgccgcgccgcaagcgcgattactga
DBGET
integrated database retrieval system
