Luteibacter aegosomatissinici: L2Y97_22275
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Entry
L2Y97_22275 CDS
T09055
Symbol
rtcR
Name
(GenBank) RNA repair transcriptional activator RtcR
KO
K14414
transcriptional regulatory protein RtcR
Organism
laeo
Luteibacter aegosomatissinici
Brite
KEGG Orthology (KO) [BR:
laeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
laeo03000
]
L2Y97_22275 (rtcR)
Transcription factors [BR:
laeo03000
]
Prokaryotic type
Other transcription factors
Others
L2Y97_22275 (rtcR)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA
Mg_chelatase
AAA_16
AAA_22
MCM
NACHT
AAA_2
AAA_33
AAA_19
AAA_14
AAA_30
AAA_28
AAA_18
AAA_7
ABC_tran
RsgA_GTPase
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
UPG94510
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Position
4982853..4984442
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AA seq
529 aa
AA seq
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MKTKVVIGFLGTQLDAGDKADRWERWRPTVSLGMHEDFLLGRIELLADERRTARTLKRVV
ADLAQVAPETAVKVHDTYIENPWDFESVYETLYAFARSYPFDVENEDYYVHITTGTHVAQ
ICLFLLTESRHLPGRLLQASPPRQAGVTASVGELSVIDLDLSRYDRLAQRFQVEKQEDRT
HLKSGIATRNVAFNRMIDQIETVGSRSSAPILLMGPTGAGKSQLARRLFELKQGRREVSG
RFVEVNCATLRGDGAMSALFGHVKGAYTGAAGERAGLLRSADKGLLFLDEIGELGADEQA
MLLRALEDKRFLPVGGDREVASDFQLIAGTNRDLGMRVAEGRFRDDLYARLNIWSFHLPG
LAERMEDIEPNLDYELDRFARDENRRVTFNKEARSRYLAFATSGEAPWTGNFRDLGASVV
RMATLAPAGRINEACVDEELGRLRRLWRQETSGDTLRELLGDAVDEIDLFDRVQLAEVVK
VCRRCRSVSEAGRQLFAASRVKRASTNDADRLRKYLTRFGLAWEMISHA
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccaaggtggtgatcggcttcctgggtacccagctcgatgcgggcgacaaggcg
gaccgctgggaacgctggcgtccgaccgtgtccctgggcatgcacgaggatttcctcctg
ggccgcatcgagctgctcgctgacgaacggcgcaccgcacgaacgctgaagcgcgtcgtg
gccgatctggcccaggtagcgcccgagaccgcggtgaaggtgcatgacacctacatcgag
aatccgtgggacttcgagtcggtttacgagacgctctacgcctttgcacggagctacccg
ttcgatgtggagaacgaggactactacgtccacatcaccaccggcacccacgtcgcgcag
atctgcctgttcctgctcaccgaaagcaggcacctgcccggccgcctgctgcaggcatcg
ccgccacgccaggcaggcgtcacggccagcgtcggcgagctcagcgtcattgacctggat
ttgtcccgctacgatcggctcgcgcaacgcttccaggtggagaagcaggaagaccgcacg
cacctgaagagcggcatcgccacacgcaatgtcgccttcaatcgcatgatcgatcagatc
gaaaccgtgggcagccgctcgtcggcacccatcctgttgatgggacccacgggtgcgggc
aagagccagctcgcacggcgcctattcgaactcaagcaggggcgacgcgaggtaagcggc
cgcttcgtcgaagtgaactgcgccacgctgcgtggcgacggcgcgatgagcgcgctgttc
ggccacgtcaaaggcgcttataccggcgcggcgggcgagcgtgccggcttgttgcgcagc
gccgacaaaggcctgctcttccttgacgagatcggcgaactgggtgccgatgaacaggcc
atgttgttgcgcgcgctcgaggacaagcggttcctgcccgtgggtggcgatcgcgaagtt
gccagcgacttccagcttatcgccggtaccaaccgcgatctgggcatgcgtgtcgcggag
ggtcgtttccgcgacgatctgtacgcgcggctgaacatctggtcgttccacctgcccggc
ctcgccgagcgcatggaggatatcgagccgaaccttgattacgaacttgaccgcttcgcc
cgtgacgagaaccgccgcgtcaccttcaacaaggaagcgcgttcgcgctacctggcgttc
gcgacatcgggcgaggcgccgtggacgggtaacttccgcgatctcggtgcatccgtggtg
cgcatggccacgctggctccggccggccgcatcaacgaagcgtgcgtggatgaagaactg
gggcgcctgcgacgattgtggcggcaggaaaccagcggcgacacgctgcgtgagcttctc
ggtgatgccgtcgacgagatcgacctgtttgatcgcgtgcagctcgccgaagtggtgaag
gtgtgccggcgttgccgcagcgtatcggaagccggacggcagctttttgccgcctcgcgc
gtcaagcgggcgagtaccaacgacgccgaccgcctaaggaaatacctcacccgctttggt
ctcgcgtgggaaatgatctcccatgcgtga
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