Luteibacter aegosomaticola: L2Y96_05100
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Entry
L2Y96_05100 CDS
T09073
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
laes
Luteibacter aegosomaticola
Pathway
laes02020
Two-component system
laes02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
laes00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
L2Y96_05100
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
L2Y96_05100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
laes03021
]
L2Y96_05100
Transcription machinery [BR:
laes03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L2Y96_05100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Relaxase_C
HTH_IclR
HTH_38
Motif
Other DBs
NCBI-ProteinID:
UPG91156
LinkDB
All DBs
Position
complement(1153436..1154917)
Genome browser
AA seq
493 aa
AA seq
DB search
MKPGLQFRLHQQLTLTPQLQQAIRLLQLSQLELEAELRQIAESNPLLEFAEDAESEPEAA
EESASFDEAMEYRARDEQPAKATREEESTASPSEDLAPEWDDDRFHGEAGDYAGAPSRNG
GGDEEGFEPQNAAPESLQQHLEWQLNLSQFTPRDHAIATAIIHVLDEDGYLRDGLEAVQS
ALREFHCDLDEIEAVRKRIQRFDPTGIASLDLRDCLLCQLSQFSDETPQRNLAVRIVTDE
IELLARNDTSKIARRLKAAEADVAVAASLIRSLDPRPGAALDATPVEYVAPDVYARRENG
RWRVSLNPDAQPRLGLNQHYCNLIARARGDDATWMKGQLQEARWLLKSLQSRAETLTKVA
EVIVRRQSAFLDYGPEAMHPLVLREVAEEVGMHESTISRVTTRKYMHTPRGTFELKHFFS
SGVATEDGGSASATAIQAMLRKLVTAEDPRRPLSDQALAEEFHRRGIQVARRTVAKYREA
MRIPSSSERVRAG
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctggacttcagtttcgcctgcatcagcagctcacgctgacgccacagctccag
caggccatccgcctgctgcagttgtcgcagctggagcttgaggccgaactccgccagata
gcggaaagcaacccactcctcgagttcgcggaagatgccgaatccgagcccgaggctgcg
gaagaatccgccagcttcgacgaggccatggaataccgggcccgcgacgagcagcccgcc
aaggccacccgcgaggaagaatccaccgcgtcgccttccgaggatctcgcccctgaatgg
gacgacgaccgtttccacggcgaggcgggggattacgccggcgcgccgtcgcgtaacggc
ggcggcgatgaagaaggcttcgagccccagaacgccgcgccggaaagcctccagcaacac
ctggaatggcagctcaacctctcgcagttcacgccgcgcgaccatgcgatcgccaccgcg
atcatccacgtgctggatgaggacgggtacctgcgtgacggcctggaggcggtgcagagc
gccctgcgcgagttccattgcgacctcgacgagatcgaggcggtgcgcaagcgcatccag
cgcttcgaccccacgggcattgccagcctcgacctgcgcgattgcctgctctgccagctg
agccagttctcggacgagacgccccagcgcaacctggcggtacgcatcgtcaccgacgaa
atcgagttgctggcccgcaacgacaccagcaagatcgcccggcgcctgaaggcggccgag
gccgatgtcgccgtggccgcctcgctcatccgcagcctcgatccccgcccgggcgcggcg
cttgacgccaccccggtggaatacgtggcgcccgatgtctacgcgcggcgtgagaacggc
cgctggcgggtcagcctgaatcccgatgcccagccccggctaggcctcaaccagcattac
tgcaacctgatcgcccgtgcccgcggcgatgacgccacgtggatgaagggccagctgcag
gaggcccgctggctcctgaagagcctgcagtcgcgcgccgagaccctgaccaaggtcgcc
gaggtcatcgtccgtcggcagagcgccttcctcgattacggccccgaagccatgcacccc
ctggtcctgcgcgaggtggcggaggaagtgggcatgcatgaatcgaccatttccagggta
accacgcgcaagtacatgcatacgccgcgcggtaccttcgagctcaagcacttcttctca
agcggcgtcgctacggaagacggtggcagcgcgtctgccacggccatccaggccatgctg
cgcaaactggtcacggcggaggatccgcgccgcccgctgtccgaccaggcgctcgcggag
gaattccatcgacgcggtattcaggtcgcacgccgtacggtggccaagtaccgcgaggcg
atgcggatccccagttccagtgaacgcgtgcgagccggttaa
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