Luteibacter aegosomaticola: L2Y96_05605
Help
Entry
L2Y96_05605 CDS
T09073
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
laes
Luteibacter aegosomaticola
Pathway
laes03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
laes00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
L2Y96_05605 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
laes03021
]
L2Y96_05605 (rpoC)
03400 DNA repair and recombination proteins [BR:
laes03400
]
L2Y96_05605 (rpoC)
Enzymes [BR:
laes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
L2Y96_05605 (rpoC)
Transcription machinery [BR:
laes03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
L2Y96_05605 (rpoC)
DNA repair and recombination proteins [BR:
laes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
L2Y96_05605 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Biotin_lipoyl
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
UPG91247
LinkDB
All DBs
Position
1264690..1268904
Genome browser
AA seq
1404 aa
AA seq
DB search
MKDLLNLFNQQRQTLDFDAIKIALASPELIRSWSYGEVKKPETINYRTFKPERDGLFCAA
IFGPIKDYECLCGKYKRMKHRGVVCEKCGTEVTLAKVRRERMGHIELASPTAHIWFLKSL
PSRIGLMLDMTLRDIERILYFEAFVVIDPGLTALERGQLLSEDQYLEATEEHGDEFDARM
GAEAVYELLKSLDLPGEVIRLKEEISSTNSETKLKRLTKRVKLIEAFLESGNKPEWMVLT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELAAPDIIVRNEKRMLQ
ESVDALLDNGRRGRAITGTNKRALKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVGPT
LRLHQCGLPKKMALELFKPFIFAKLQARGEATTIKAAKKLVEREESQVWDILEEVIREHP
VMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSIEAQLEA
RALMMSSNNVLSPANGEPIIVPSQDVVLGLYYMTRELVNAKGTGMVFANLGEVRRAYDNR
AVELHAKVKVRVRVFNVSETGERTASTQIVDTTVGRALLAEIIPEGLPFALVNTELTKKN
ISRLINQSYRLLGLKESVVFADKLMYTGFRFATRAGISIGIDDMKIPAEKKAILEEAEKE
VVEIQEQYQSGLVTAGERYNKVVDIWSRTNELVAKAMIDGIGTEKVTDAEGKQVNQKTMN
SLYIMADSGARGSAAQIRQLAGMRGLMARPDGSIIETPIKANFREGLNVLQYFNSTHGAR
KGLADTALKTANSGYLTRRLVDVAQDVVITHHDCGTEDGVMMAPIVEGGDVVEPLRERVL
GRTVVEDVYAPGDDDQPIVTRDTLLDESLVEKLDKAGVQLIKVRSPITCRASHGVCALCY
GRDLARGHLVNMGEAVGVVAAQSIGEPGTQLTMRTFHIGGAASRAAAVDNVTVRTTGSLK
FNNLKSVEHSAGHLVAVSRSGEVSVIDVNGRERERYKVPYGATIAVKDGDPVKAGQTVAN
WDPHTHPIVTEVAGVVRFIDFIDGVTVQSQTDELTGLESAVVTDPKRRGTQAKDLRPIVR
LEDSKGRELKLPGTDIAAQYFLPAGAIVSIQNGAEVGVGDVVARIPQETSKTRDITGGLP
RVADLFEARKPKEPAILAERSGIISFGKDTKGKQRLIIKDVDGNEHEELIPKWRQVIVFE
GEHVEKGETVVDGEPNPHDILRLLGVEPLASYLVKEIQDVYRLQGVKINDKHIEAIIRQM
LRKVEITEAGDSTYLRGEQVERVRMNEENERAEKRGERPASFESVLLGITKASLATESFI
SAASFQETTRVLTEAAVRGTRDTLRGLKENVIVGRLIPAGTGLAYHASRRSQSGLTDLEL
QTLQGSGSSVSFEEAPAGSNDSAE
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacctgctcaatctgttcaaccagcagcgacagacgctggacttcgacgcgatc
aagatcgctctggcttcgccggagctgatccgctcgtggtcgtacggcgaagtgaagaag
ccggaaaccatcaactaccgcacgttcaagcctgagcgtgacggtctgttctgcgcggcc
atctttggtccgatcaaggactacgagtgcctgtgcggtaagtacaagcgcatgaagcac
cgcggcgtggtgtgcgagaagtgcggtaccgaggtcaccctggccaaggtccgtcgcgag
cgcatgggccacatcgagctggccagcccgaccgcgcacatctggttcctgaagtcgctg
ccgtcgcgcatcggcctcatgctggatatgaccctgcgtgacatcgagcgcatcctgtac
ttcgaagcgttcgtcgtgatcgatccgggcctgaccgcgcttgagcgcggccagctgctc
agcgaagaccagtacctggaagccaccgaagagcacggtgacgagttcgacgcccgcatg
ggtgccgaggccgtctacgagctgctgaagagcctcgacctgccgggcgaagtcatccgc
ctgaaggaagagatctcctcgaccaactcggaaaccaagctcaagcgcctcaccaagcgc
gtgaagctgatcgaggcgttcctggaatccggcaacaagccggagtggatggtgctgacc
gttcttccggtgctcccgccggatctgcgtccgctcgtcccgctggacggtggccgtttc
gccacgtccgacctgaacgacctgtaccgccgcgtcatcaaccgtaacaaccgcctgaag
cgcctgctcgaactcgctgcgccggacatcatcgtccgcaacgagaagcgcatgctgcag
gaatcggtcgatgcgctgctcgacaacggccgtcgcggtcgtgccatcaccggcacgaac
aagcgcgcgctgaagtcgctggccgacatgatcaagggcaagcagggtcgcttccgccag
aacctgctgggtaagcgcgtcgactactcgggccgttcggtcatcgtggtcggcccgacc
ctgcgcctgcaccagtgcggcctgccgaagaagatggcgcttgagctgttcaagcccttc
atcttcgccaagctgcaggctcgtggtgaagccaccacgatcaaggctgccaagaagctc
gtcgagcgcgaagagtcgcaggtgtgggacatcctcgaagaggtgatccgcgaacatccg
gtgatgctgaaccgcgcgccgaccctgcaccgtctgggtatccaggcgttcgagccggtc
ctcatcgaaggcaaggcgatccagctgcacccgctcgtctgtaccgcgttcaacgcggac
ttcgacggtgaccagatggccgtccacgtgccgctctcgatcgaggcgcagctcgaagcc
cgcgccctgatgatgtcgtcgaacaacgtgctgtcgccggcgaacggcgagccgatcatc
gtgccgtcgcaggacgttgtgctcggcctgtactacatgacccgtgagctggtgaacgcg
aagggcaccggcatggtgttcgcgaacctcggcgaagtgcgtcgcgcctacgacaaccgt
gcggtcgaactgcacgcgaaggtcaaggtccgcgtgcgcgtgttcaacgtgtcggagacc
ggcgagcgcacggcaagcacccagatcgtggacaccacggtcggtcgcgccctgctggcc
gagatcatcccggaaggcctcccgttcgccctggtgaacacggagctgaccaagaagaac
atctcgcgcctgatcaaccagagctaccgtctccttggtctcaaggaatcggtcgtgttc
gcggataagctgatgtacaccggcttccgtttcgcgacgcgcgccggtatctcgatcggt
atcgacgacatgaagatcccggctgaaaagaaggcgatcctcgaggaagccgagaaggaa
gtcgtcgagatccaggagcagtaccagtcgggtctcgtgaccgctggtgagcgctacaac
aaggtcgtcgacatctggtcgcgtacgaacgaactcgtcgcgaaggccatgatcgacggt
atcggtaccgagaaggtcaccgatgccgaaggcaagcaggtcaaccagaagaccatgaac
tccctgtacatcatggccgactcgggtgcgcgtggtagcgcggcccagattcgccagctg
gcaggtatgcgtggcctgatggcccgtccggatggctcgatcatcgagacgccgattaag
gcgaacttccgtgaaggcctgaacgtcctgcagtacttcaactccacccacggtgctcgt
aagggcctggcggatacggcgctgaagacggctaactcgggttacctgacccgtcgcctc
gtcgacgtggcccaggacgtggtcattacgcaccacgactgcggcaccgaagacggcgtg
atgatggccccgatcgtggaaggcggcgatgtggtcgagccgctgcgcgagcgcgtgctc
ggtcgtacggtcgtcgaagacgtctacgccccgggcgatgacgatcagccgatcgtcacc
cgcgatacgctgcttgacgaaagcctggtcgagaagctcgacaaggccggcgtgcagctg
atcaaggtgcgttcgccgatcacctgccgtgccagccatggcgtgtgcgccctgtgctac
ggccgcgatctggcccgtggtcacctggtgaacatgggtgaggccgtgggcgttgtcgcc
gcgcagtccatcggtgagccgggtacccagctgacgatgcgtacgttccatatcggtggt
gcggcttcccgtgccgctgccgtggataacgtcaccgttcgcaccaccggttcgctgaag
ttcaacaacctcaagtcggtcgagcattcggcgggccacctggttgccgtgtcccgttcg
ggcgaagtgagcgtcatcgacgtgaacggccgcgagcgtgagcgctacaaggtgccttac
ggtgcgaccatcgcagtgaaggacggcgacccggtcaaggccggccagaccgtcgcgaac
tgggatccgcatacccacccgatcgtcacggaagtggccggtgtggtccgcttcatcgac
ttcatcgatggcgtgaccgtccagtcgcagaccgacgaactgaccggcctcgagtcggcg
gtggtgaccgatccgaagcgtcgcggtacgcaggccaaggatctgcgcccgatcgtccgc
ctggaagacagcaagggccgtgagctcaagctgccgggtaccgacatcgcggcccagtac
ttcctgccggccggtgccatcgtctcgatccagaacggcgccgaagtgggcgtgggtgac
gtcgtcgcccgtatcccgcaggaaacgtcgaagacccgcgacatcaccggtggtcttccg
cgcgtggccgatctgttcgaagcccgcaagccgaaggagccggcgatcctggccgagcgc
tcgggtatcatcagtttcggcaaggacaccaagggcaagcagcgtctcatcatcaaggat
gtggacggcaacgagcacgaagagctgattccgaagtggcgtcaggtcatcgtgttcgaa
ggcgagcacgtggagaagggcgaaaccgtcgtggacggcgagccgaatccgcatgacatc
ctgcgcctgctgggtgtcgagccgctggccagctacctggtcaaggaaatccaggacgtc
taccgcctgcagggcgtgaagatcaacgacaagcacatcgaagcgatcattcgccagatg
ctccgcaaggtcgagatcaccgaggcaggggatagcacctacctgcgcggtgagcaggtc
gagcgcgtccgtatgaacgaggagaacgagcgcgctgagaagcgtggcgagcgtccggcc
tcgttcgaatcggtcctgctgggtatcaccaaggcctcgctggccaccgagtcgttcatc
tcggcggcctcgttccaggagaccacccgcgtcctcaccgaggccgctgttcgcggcacc
cgtgatacgttgcgtggcctcaaggaaaatgttattgttgggcggctaatccctgcgggt
acgggtctggcctaccacgcttcgcgtcgtagccagagcggcctgacggacctggaactc
cagaccctccagggttcgggttcctccgtctcgttcgaagaagctcccgccgggtccaac
gatagcgccgagtga
DBGET
integrated database retrieval system
