Luteibacter aegosomaticola: L2Y96_06920
Help
Entry
L2Y96_06920 CDS
T09073
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
laes
Luteibacter aegosomaticola
Pathway
laes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
laes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
L2Y96_06920 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
laes03400
]
L2Y96_06920 (recB)
Enzymes [BR:
laes01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
L2Y96_06920 (recB)
DNA repair and recombination proteins [BR:
laes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
L2Y96_06920 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_25
AAA_12
AAA_11
TPIP1
Motif
Other DBs
NCBI-ProteinID:
UPG91495
LinkDB
All DBs
Position
1568726..1572376
Genome browser
AA seq
1216 aa
AA seq
DB search
MSFAVEPLRPLALPLDGVRLIEASAGTGKTWTIAALYVRAVLGHGMPQPLLPPQILVVTF
TEAATQELRERIRARLVEAAAAFRSGGSTEPLLGDLIASYAPGDLSGCARRLELAAQWMD
EAAIFTIHGWSQRMLTQHAFGSGHAFAQTLEPDESELLAECVRDYWRQTFYPLDEATLAA
VQAEWRTPDALLRSLKPLLAGGEATLRVDGELLSVGEGLDAVLAERRAWDDEDQRRMADA
ARSWRDDAEAIDKKIIEAASTVLHKGWYKPERMPADMAAMRRWASNGEPGGFDIARYSVS
RLGKATGKGKARPEHPAFAAIEHWTEWQASRVAIRHVVLADAVERVRTRFIEQKRRRAQI
GFDDLLLRLDRALATPAGADLATTIRRQYPLALIDEFQDTDTLQYRIFRAVYGAVADVGL
LLIGDPKQAIYSFRGADIHTYLAARAEAQAPHYSLDTNFRSTQGMVDAVNALFAHGETHA
SGAFHFADRGLPFTPVRARGRDERFIRGGREQAAMHLWLLDDEQPIGIRYYRQEMAAACA
SEIVRLLDEAARGEAGFQPAGGDLRALRPADIAVLVRSHAEASELRAALAARRVRSVFLS
DRDSVWESVEAGDLLFWLRAVAEPSSDTAMRAALATRTLHLGFGELERLNTDELHWEARG
REFMALRETWRQAGVLAMLHRLLHIFDLPARLLMQEYGERALTNVLHLAELLQQAAATLD
GEQALIRHLAERITDTASHHGDDQIVRLESDDDLVKVITIHKSKGLEYPLVFLPFVCASG
KARSGQGYRYHDGEGMSLELLSEKQGGPAVAEAKEAAERAALQEDLRLLYVALTRARHAC
WLGIAPVAASNAKKPQVHRSAFGHLLTGGAEIDNGAIAGLLQSLARGTPSIEVAYMPAPD
DRRYVPPVREERLAPPREPRLARAEPWRIGSYSGLRYDEAEAEVPAPETATDDVIVEYVT
EPVAVVADPASIHAFHRGADAGTFLHDLLEWIADEGFGRIADDPDRLRDTVARRCERRGW
EGAIDLLTDWLLVLLRTPMRLPDGKSLALRALDDPALYRAELEFLFEARHVDTLVLDRIV
REYTLDDAPRPSLSSDTLNGMLKGFIDLIIEHEGRWYVADYKSNWLGPDAHAYTPEAMRA
SILDSRYELQYALYLLALHRLLRSRLGAAYDYDTHVGGAVYLYLRGVDGHGHGVHVERPP
KVMIEAMDRLFEGARA
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcgccgtcgaaccgcttcgcccgttggcacttccgctggatggcgtgcgcctg
attgaggcgagcgccggtaccggcaaaacctggacgatcgccgcgctctacgtgcgggcg
gtgttaggtcatggcatgccacagccgctgctgccgccgcagatcctcgtcgtgacgttt
acggaagccgcgacccaggaattgcgcgagcgtattcgcgcccgcctcgtcgaagcggcg
gcggctttccgtagcggcggctccaccgagcccttgcttggcgacctcatcgccagttac
gcgcccggcgatctgtccggttgcgcgcggcgccttgaactcgccgcacaatggatggac
gaagccgcgatcttcaccatccatggctggagccagcggatgctgacccagcacgcgttc
ggcagtgggcatgcgtttgcgcagacactggagccggacgaaagcgaactcctcgcggag
tgcgtccgcgactactggcgacagaccttctacccgctcgatgaggccaccctggcggcg
gtccaggcggaatggcgcacgccggatgccctgttgcgctcgctcaagccgctgctcgcc
ggcggtgaggcgaccttgcgcgtcgatggtgagctgctcagcgtcggcgaaggtctcgat
gcggtgcttgccgagcggcgcgcatgggatgacgaggatcaacggcgcatggccgatgcg
gcgcgatcgtggcgcgacgacgccgaagcgatcgacaaaaagatcatcgaagcggccagc
acggtgctgcacaagggctggtacaaaccggagcgtatgccagctgacatggcggcgatg
cgccgttgggccagcaacggtgagcccggtggtttcgatatcgcacggtattcggtatcc
cggctcggcaaggctacgggcaagggcaaggcccgcccggagcacccggcgtttgcagcg
atcgaacactggacggaatggcaggcgtcgcgggtcgctatccgccacgtcgtcctggcc
gatgcggtcgagcgcgtgcgtacgcgctttatcgaacagaagcgccgtcgcgcgcagatc
ggcttcgacgatttgctgctgcgccttgatcgtgcgctggcgacgccggcgggcgccgat
ctggctacgacgatccgccggcagtatccgctggcgctcatcgacgaattccaggatacc
gatacgctgcagtaccggatcttccgggccgtctatggtgccgtcgcggacgtgggcctg
cttctgattggcgaccccaagcaggcgatttactcgtttcgcggcgccgatatccataca
tacctcgccgcgcgagccgaggcgcaggcaccgcattacagcctcgataccaatttccgt
tccacccagggcatggtcgatgcggtgaacgccctgttcgcccacggcgagacccacgcg
tcaggcgcttttcatttcgccgaccgaggccttccgttcacgcccgtccgcgcgcgagga
cgcgacgaacgattcattcgcggggggcgtgagcaggcagcgatgcatctttggttgctg
gatgacgaacagccgattggcatccgttattaccgccaggagatggcggccgcctgcgct
agcgaaatcgtccgcctgctcgacgaggccgcgcgcggtgaagccgggttccagccggcc
ggcggtgatctgcgcgcgctacgcccggcggatatcgccgtactggtgcgcagtcacgcc
gaagccagcgagcttcgtgccgcgctcgccgcgcgccgtgtccgcagcgtcttcctgtca
gacagggactcggtgtgggaaagcgttgaggcgggcgatctgctgttctggctgcgtgcc
gttgccgagccgtcatccgataccgcgatgcgcgccgcgctggcgacacgcacgctgcat
ctcggttttggcgaactggagcggctgaacaccgacgagctgcattgggaagcccggggc
agggagttcatggccctgcgcgagacctggcggcaggccggtgtgctggccatgttgcac
cgcttgttgcacatcttcgacttgcccgcacgcctgctcatgcaggagtacggtgagcgc
gcgctcaccaacgtgctgcacctcgccgaattgttgcagcaagcagcggcgacgctcgat
ggcgaacaggcgctcatccgtcatctcgccgagcggatcacggatacggcaagccaccac
ggcgatgaccagatcgtgcgcctggaaagcgatgacgacctggtcaaggtcatcaccatc
cacaaatccaagggcctggaataccccctggtcttccttccgttcgtatgtgccagcggt
aaggcgcgttccggtcagggctaccggtaccacgatggcgagggcatgtcgcttgaactg
ctgagtgagaagcagggtggccctgccgtggccgaggcgaaagaggcggcagagcgcgcc
gcgctgcaggaagatcttcgcctgctctacgttgcactgacccgtgcgcggcatgcctgc
tggctgggtatcgccccagtggcggcgagcaacgcgaagaagcctcaggtgcatcggagc
gcgttcggccacctgcttacgggtggtgcggagatcgacaatggtgccatcgccggtctg
ctccagtcgcttgcccgtggcacaccgtcgatcgaggtggcctacatgcctgcgccggat
gatcggcgctatgtacccccggtccgtgaggagcgcctggcgccgccgcgcgagccgcgt
ctagcgcgtgccgagccctggcgcatcggcagctacagcggtctacgctatgacgaggcc
gaagccgaagttccggcacccgaaaccgcgaccgacgatgtcatcgttgaatatgtcacc
gagcccgtggcagtggtggccgatccggccagcatccacgcgtttcaccgtggcgcggat
gccggtaccttcctgcacgatctgctcgagtggatcgccgatgagggctttggccgcatc
gccgacgaccccgaccgcctgcgcgacacggtggcgcgccgttgcgagcgccgtggttgg
gagggcgccatcgacctgctgacggactggttgttggtcctgttgcgtacaccgatgcgt
ctacccgatggcaagtcactggcgctgcgcgccctggacgacccggcgctttaccgcgcc
gaactcgaattcctgtttgaagcgcgtcacgtcgatacgcttgtactggaccgaatcgtc
cgcgaatacacgctggacgacgcgccacgcccctcgctgtcgagcgataccctgaacggc
atgctcaagggcttcatcgatctcatcatcgagcacgagggccgctggtacgtggccgac
tacaagtcgaactggctgggccccgacgcgcatgcctacacgcccgaagcaatgcgcgca
tcgatcctggactcgcgctatgagctgcagtacgcgctttacctgctggcgctgcaccgc
ctgctgcgctcgcgcctgggcgcggcatacgactacgacacccatgtcggtggcgcggtc
tacctttatctgcgtggcgtcgatggccacggccatggcgtgcacgtggagcgcccgcca
aaggtgatgatcgaagccatggaccgcttgtttgaaggagcccgcgcatga
DBGET
integrated database retrieval system
