Luteibacter aegosomaticola: L2Y96_06925
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Entry
L2Y96_06925 CDS
T09073
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
laes
Luteibacter aegosomaticola
Pathway
laes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
laes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
L2Y96_06925 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
laes03400
]
L2Y96_06925 (recD)
Enzymes [BR:
laes01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
L2Y96_06925 (recD)
DNA repair and recombination proteins [BR:
laes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
L2Y96_06925 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
AAA_11
Viral_helicase1
Helicase_RecD
SH3_13
AAA_22
UvrD-helicase
SLFN-g3_helicase
AAA_28
nSTAND3
AAA_16
AAA_33
T2SSE
Mg_chelatase
AAA
Motif
Other DBs
NCBI-ProteinID:
UPG91496
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All DBs
Position
1572373..1574256
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AA seq
627 aa
AA seq
DB search
MIGDINAWLDHGTGEGRLRPMDRAFARFLATLDPSADARVLAAAALVSRELADGHICVDV
ASLGEHDGALVGASDWLQGTPLVASPDGAPSAPLVLDGPLLYLRRFWRDEARVAAAILHR
LPALPEPRGLDRELDRLFPAEADGSAIDWQKVACAIAARSSFAVITGGPGTGKTTTVVRL
LGLLQTLAVRASQPRLRIRLAAPTGKAAARLNASIAAQVAQLDVDAAVREGIPAEVTTLH
RLLGSRPDTRAFHHNADNPLHVDVLVIDEASMIDLEMMAATLDALPAGARLILLGDKDQL
SSVEAGAVLGDLCARAEPGHYDDATRAWLRDVAGVDVGAWTDASAAWPLDQRITMLRRSR
RFGSASGIGALATAINQGDAAAVNAAFAGGFADIARQPASAAAVAALAIEGRAEAPGYRH
YLQWINDHRPAADAGDEAFAAWGRGALEAYGRFQLLCATRRGDLGVDGQNERIAQGLMER
ELIKATTGWYEGRPVIVARNDYAVGLMNGDIGVTLAVPDGQGGSMLRVAFLVMDEAGGER
LRFVTPSRLTAVETVYAMTVHKSQGSEFEHTALALPPEPSPVLTRELVYTGVTRARRYFT
LLATADILAYAVARKTKRASGLLGRLR
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgatcggcgatatcaacgcgtggctcgatcacggcaccggggaggggcggctccggcct
atggatcgcgccttcgcacgcttcctcgccacgctcgatccgagcgctgatgcacgcgtg
ctcgcggcggcggcgctggtcagtcgcgagctggcggacggacatatatgcgtcgacgtc
gcctcgctcggcgaacacgatggcgcgttggtcggtgcctctgattggctgcaaggtacg
cccctggtcgcttcacccgatggcgcgccgtccgcaccgctcgtgttggatggcccgttg
ctgtatctgcggcgcttctggcgcgatgaagcccgcgttgccgcggcgatcctgcatcgg
ctaccggcgctgcctgagccgcgtggcctggacagggagcttgaccgcctgttccccgcc
gaggccgatggctcggccatcgactggcagaaggtggcttgcgccatcgcggcgcgcagt
tcgtttgcggtgatcaccggcggccccggcacgggcaagaccacgacggtggttcgcttg
ctggggctgctgcagaccctggcggtaagagccagccagccacgcctccgtattcggctt
gccgcgccaacgggcaaggcggccgcgcgccttaatgcctccatcgcggcgcaggtagcg
cagcttgatgtcgacgccgccgtgcgcgaaggcattcccgccgaagtcaccaccctgcat
cgcctgcttggcagccgcccggatacgcgcgcgttccatcacaacgccgataacccgcta
cacgtcgacgtccttgtgatcgatgaagcttcgatgatcgatctggaaatgatggcggcg
acgctggatgcgctgccggcgggcgcgcggctcatcctgctgggcgacaaggatcagctt
tcgtcggtggaggcgggcgcggtacttggcgatctttgcgctcgcgcggagcccggccat
tacgatgacgcgacgcgtgcgtggttgcgtgatgtcgccggcgttgacgtcggtgcatgg
accgatgcgtccgccgcatggcctctcgaccagcgcatcaccatgcttcggcgcagtcgc
cgcttcggcagcgccagtggcatcggcgcgcttgcaacggcgatcaaccagggtgacgcg
gcggcggtcaacgcggctttcgccggcgggttcgcggacatcgcacggcaaccggcgagc
gccgctgcggtggccgcattggctatcgaagggcgcgccgaggcgccgggctatcggcac
tacctgcagtggatcaacgaccatcggcctgccgcggatgcgggtgacgaggcgtttgcg
gcctggggccgtggcgcgctggaggcgtacggccggttccagctgctctgcgccacgcgg
cgtggcgacctgggggtggatgggcagaatgagcggattgcccaaggcctgatggagcgc
gagctgatcaaggccaccacgggttggtacgaaggccggcccgtgatcgtggcgcgcaac
gattacgccgtgggcctgatgaacggcgatatcggcgtcaccctggccgtaccggacggg
cagggcggcagcatgctgcgggtagccttcctggtgatggatgaggctggcggtgagcgc
ctgcgcttcgtgacacccagtcgcctcacggccgtggagaccgtctatgcgatgacggtg
cacaagtcgcagggctctgagttcgaacacacggccctggccttgccgccggagccgtca
cccgtgctcacccgcgaactggtctataccggggtcacccgcgcgcggcggtatttcacg
ctgctcgcaaccgccgacatcctcgcatacgcggtagcgcggaaaacaaagcgggcctca
ggcctgctggggcggctgcgctga
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