Luteibacter aegosomaticola: L2Y96_09330
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Entry
L2Y96_09330 CDS
T09073
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
laes
Luteibacter aegosomaticola
Brite
KEGG Orthology (KO) [BR:
laes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
laes03009
]
L2Y96_09330 (rlmD)
Enzymes [BR:
laes01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
L2Y96_09330 (rlmD)
Ribosome biogenesis [BR:
laes03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
L2Y96_09330 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
PCMT
MTS
Cons_hypoth95
Met_10
Methyltransf_11
RrnaAD
Methyltransf_23
Methyltr_RsmB-F
PrmA
Methyltransf_12
Methyltransf_15
Methyltransf_32
CMAS
Motif
Other DBs
NCBI-ProteinID:
UPG91948
LinkDB
All DBs
Position
2138299..2139600
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AA seq
433 aa
AA seq
DB search
MTDIEATITDLSHDGRGVARIDNKATFVSGALPGERVLLKYRKRHRNYDDAEVVSIIEAS
PDRVEPKCRHFGQCSGCSLQHMAPEAQIAAKQRVLAENFERIGKVTPESWLAPLTDQPWS
YRRKGRFSVRFVNKKDRVLVGFREESNPRFVADIDVCEVIHPAIGPKVGLLATLIQTLDT
ARDIPQIEFAAGDDTVALVFRHLSPLTEGDRAKLTAFAQEHGFAIYLQPGNHSTVAPLWP
ESPRLSFAIAADNVTLDFLPLDFVQVNAGMNQRMLARTLELLDLQSTDKVLDLFCGLGNF
TLPIARHAAEVVGVEGEHGLVQRAAENAARNGLANASFRVANLFEDQRNEPWAKQAWDKL
LLDPPRAGADKVLEYLPRKGTNRIVYVSCHPGSLARDAGILVEKHGFRLVSAGVMDMFPH
TAHVESIALFERD
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacatcgaagccaccatcaccgacctcagccacgatggccggggcgtcgcccgt
atcgataacaaggccacctttgtctccggcgcgctcccgggcgagcgggtgttgctgaag
taccgcaagcgccaccgtaactatgacgatgctgaagtggtatcgatcatcgaggcctcg
cccgatcgcgtcgagccgaaatgccgccacttcggccagtgcagcggctgctcgctccag
cacatggctccggaggcgcagatcgccgccaagcagcgcgtgctcgccgagaacttcgaa
cggatcggcaaggtcacgccggaaagctggctggcgccgctcaccgatcagccgtggagc
taccgccgcaaggggcgcttctcggtgcgtttcgtcaacaagaaggatcgcgtgctggtc
gggttccgcgaggaatccaacccgcgcttcgtcgccgatatcgacgtgtgtgaagtgatc
cacccggccatcggccccaaggtgggcctgctggccacgctgatccagaccctcgacacc
gcgcgtgacatcccgcagatcgaattcgctgccggtgacgacacggtggccctcgtgttc
cgccatttgtcaccgctgaccgagggcgatcgggccaagctcacggcgttcgcgcaggag
cacggctttgccatctacctgcagccgggcaatcacagcaccgtagcgccgctgtggccc
gaatcgccgcgcctgtcgttcgccatcgcggccgacaatgtcacgctggatttcctgccg
ctggatttcgtccaggtcaacgcgggcatgaaccagcgcatgctggcgcgcacgctcgag
ctgctcgacctgcagtcgaccgacaaggtgctcgacctgttctgcggcctcggcaacttc
accctcccgatcgcccgccatgccgcggaagtcgtgggtgtcgaaggcgagcatggcctt
gtccagcgcgccgcggaaaacgccgctcgcaatggcctggccaatgcgagtttccgcgtc
gccaacctgtttgaagaccagcgcaacgagccctgggcgaagcaggcctgggacaagctc
ctgctggatccgccacgcgccggtgccgacaaggtcctggaatacctgccgcgcaagggc
accaaccgcatcgtctacgtctcgtgccacccgggctcgctggcccgcgacgcgggtatc
ctcgtcgagaagcatggcttccgcctggtctcggccggggtgatggatatgttcccgcac
accgcccacgtggaatccatcgcgctgttcgagcgcgactga
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