Luteibacter aegosomaticola: L2Y96_15555
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Entry
L2Y96_15555 CDS
T09073
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
laes
Luteibacter aegosomaticola
Pathway
laes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
laes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L2Y96_15555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
laes03019
]
L2Y96_15555
03009 Ribosome biogenesis [BR:
laes03009
]
L2Y96_15555
Enzymes [BR:
laes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
L2Y96_15555
Messenger RNA biogenesis [BR:
laes03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
L2Y96_15555
Ribosome biogenesis [BR:
laes03009
]
Prokaryotic type
rRNA helicases
L2Y96_15555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
adh_short
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
UPG88814
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All DBs
Position
3486371..3488239
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AA seq
622 aa
AA seq
DB search
MTSPDTDNAPALPGFSALALDANVVRALTDVGYETPSPIQAATIPPLLEGRDVIGQAQTG
TGKTAAFALPVLSRIDVKPGKPQALVLAPTRELAIQVAEAFQKYATYMPGFQVLPIYGGQ
SYGPQLQGLKRGAQIVVGTPGRIIDHLDKGTLDLSALKFVVLDEADEMLRMGFIDDVEKL
LQATPEGRQVALFSATMPSPIRRIAQTYLKDPVEITIKNKTTTAANIRQRYWWVSGVHKL
DALTRILEAESFDAMIVFARTKSATEELASKLQARGFAAAAINGDMAQAQRERVIDQLKN
GKLDILIATDVAARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRNGEAILFVTPRE
RNLLRQIERATRQPIEQMQLPTIEAVNDTRVNKFNQRITDTLAAGDLGLFQQLVEKFEQE
HNIPAIEIAAALAKIAQGDQPLLLEPPAKREYSERPPREYDRNDRPQRDFDRDRGPRDGG
DFGDRRPVREGMRQPRPHATESGKKTYRIEVGHEHGVKPGNIVGAIANEGGVEAKFIGRV
SIRDDYSLIDLPDGMPAETFNHLKKVWVAQQQLKISEWDGTEQPQSGAPPQRPRGNFRPQ
GARSGGPGGSGGGKPPRRKRDY
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgacatcccccgataccgacaacgctccggccctgcccggtttcagcgcgctcgcgctc
gacgctaacgtcgtccgcgccctgaccgacgtgggctatgagaccccctctcccatccag
gccgcgaccatcccgccgctgctcgaaggccgcgacgtgatcggccaggcccagaccggc
accggcaagaccgcagccttcgcgctgccggtgctgtcgcgcatcgacgtcaagccgggc
aagccgcaggcgctggtgctcgcgccgacgcgcgaattggccatccaggtggctgaagcc
ttccagaagtacgccacgtacatgccgggcttccaggtcctgccgatctacggcggccag
agctacggcccgcagctgcagggtctgaagcgtggcgcccagatcgtggtcggcaccccg
ggccgcatcatcgaccacctcgacaagggcacgctggatctttccgcgctcaagttcgtg
gtgctcgacgaagccgacgaaatgctccgcatgggcttcatcgacgacgtcgagaagctg
ctgcaggcgacgccggaaggccgccaggtggcgctgttctccgcgaccatgccgtcgccg
atccgccgcatcgcgcagacctacctgaaagatccggtcgagatcacgatcaagaacaag
accaccaccgcggcgaacatccgccagcgttactggtgggtcagcggcgtgcacaagctc
gatgcgctcacccgcatcctcgaggccgaaagcttcgatgccatgatcgtcttcgcccgc
accaagtcggccaccgaagaactcgccagcaagctgcaggcgcgtggtttcgccgctgcc
gccatcaacggcgatatggcgcaggcccagcgcgagcgcgtcatcgaccagctgaagaac
ggcaagctcgatatcctgatcgccaccgacgtcgccgcccgcggcctcgacgtggagcgc
atcagccacgtgctgaattacgacatcccgcacgacaccgagtcgtacgtgcaccgcatc
ggccgtaccggccgcgcgggccgtaatggcgaggccatcctgttcgtgaccccgcgtgag
cgcaacctgctccgccagatcgagcgcgccacgcgccagccgatcgagcagatgcagctg
ccgaccatcgaggcggtgaacgatacccgcgtgaacaagttcaaccagcgcattaccgat
acgctggccgcgggtgacctgggcctgttccagcagctggtcgagaagttcgagcaggag
cacaacatccctgccatcgagatcgctgccgcgctggccaagatcgcccagggcgaccag
ccgctgctgctcgagccgccggcgaagcgtgagtactctgagcgtccgccgcgcgagtac
gaccgtaacgatcgcccgcagcgcgatttcgaccgcgaccgcggcccgcgtgatggtggt
gatttcggcgatcgtcgtccggtgcgcgagggcatgcgccagccgcgtccgcacgcgacg
gagtcgggcaagaagacctaccgtatcgaagtgggccacgagcatggcgtgaagccgggc
aatatcgtgggcgcgatcgctaacgagggtggcgtcgaggctaagttcatcggccgcgtg
agcatccgtgacgattacagcctgatcgatctgccggatggcatgcctgctgagacgttc
aatcacctgaagaaggtgtgggtggcgcagcagcagctgaagatcagcgagtgggatggc
acggagcagccgcagagcggcgccccgccgcagcgtccgcgcggtaatttccgcccgcag
ggtgcccgttcgggtggcccgggcggctccggtggcggcaagccgccgcgccgcaagcgc
gactactga
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