Luteibacter aegosomaticola: L2Y96_22815
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Entry
L2Y96_22815 CDS
T09073
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
laes
Luteibacter aegosomaticola
Brite
KEGG Orthology (KO) [BR:
laes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
laes03016
]
L2Y96_22815
Enzymes [BR:
laes01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
L2Y96_22815
Transfer RNA biogenesis [BR:
laes03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
L2Y96_22815
Prokaryotic type
tRNA splicing ligases
L2Y96_22815
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
UPG90176
LinkDB
All DBs
Position
complement(5078758..5079978)
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AA seq
406 aa
AA seq
DB search
MSTNAYDVINEPGAKPIKAWTRGVPLEDEARQQLINIAKLPFVHGWLAVMPDVHLGKGAT
VGSVVPTIGAIIPAAVGVDIGCGMIATRTTLMASDLPDDLRGLRHAIEAAVPHGRTLGRR
DKGAWETPPEATVSGWSELVTDFKLITDKYPKLARTNNLHHLGTLGTGNHFVEVCLDEAD
RVWFMLHSGSRGVGNAIGTHFIERAKEDMRRWMINLPDQDLAYLPEGSEHFGDYVFAVDW
AQRYARTNRAIMMQHVIDAARKVISKPFEAWAEAVNCHHNYVSREHHLGKDVFVTRKGAV
SAKKGELGIIPGSMGTRSFIVRGLGNDESFHSCSHGAGRVMSRTQAKKTISLEEHRKATA
HVECRRDADVIDETPAAYKPIDAVMKAQEDLVEIVHTLRQVVCVKG
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccaacgcatacgacgtcatcaacgagccgggcgccaagccgatcaaggcctgg
acccgtggcgtgccactcgaggacgaggcacgtcagcagctgatcaacatcgccaagctg
cccttcgtgcacggctggctggccgtgatgcccgacgtccacctgggcaagggcgccacg
gtggggtccgtcgtgccgacgatcggcgcgatcattcccgccgcggtgggtgtggacatc
ggctgcggcatgatcgcgacccgtacgaccctcatggcttcggacctgcccgatgacctg
cgtggcctgcgccatgcgatcgaagcggccgtgccgcacggccgtacgctgggccgtcgc
gacaagggtgcctgggaaacgccgccggaagccacggtgtcgggttggagcgagctggtg
acggacttcaagctcatcaccgacaagtacccgaagctggcgcgcaccaacaacctgcac
cacctcgggacgctcggcacgggtaaccacttcgtcgaggtgtgcctcgacgaggccgac
cgcgtctggttcatgctgcactcgggctcgcgtggcgtgggtaacgccattggtacgcac
ttcatcgagcgtgccaaggaagacatgcgccgctggatgatcaacctgcccgaccaggac
ctcgcgtacctgccggaaggcagcgagcacttcggcgactacgtgtttgccgtggattgg
gcgcaacgctatgcccgcaccaaccgcgcgatcatgatgcaacatgtgatcgatgcggcc
cgcaaggtgatcagcaagccattcgaggcctgggccgaggcggtgaactgccaccacaac
tatgtgagccgcgagcaccaccttggcaaggatgtgttcgtcacccgtaagggcgcggtg
agcgcgaagaagggcgagttgggcatcatcccgggcagcatgggtacgcgcagcttcatc
gtgcgtggccttggtaacgatgaaagtttccacagctgcagccacggtgcgggtcgtgtc
atgagccgtacgcaggcgaagaagacgatctcgctcgaggagcaccgcaaagctaccgcc
cacgtggagtgccgccgcgacgcggatgtgatcgacgaaacgccggccgcctacaagccg
atcgatgcggtgatgaaggcgcaggaagaccttgtcgaaatcgtccacacgctgcgccag
gtggtctgcgtgaagggttaa
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