Lactobacillus acidophilus FSI4: SD55_0203
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Entry
SD55_0203 CDS
T03681
Name
(GenBank) competence protein ComE
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
laf
Lactobacillus acidophilus FSI4
Pathway
laf00240
Pyrimidine metabolism
laf01100
Metabolic pathways
laf01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
laf00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
SD55_0203
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
laf02044
]
SD55_0203
Enzymes [BR:
laf01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
SD55_0203
Secretion system [BR:
laf02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
SD55_0203
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
XOO_2897-deam
DUF7184
Bd3614-deam
SNAD4
Motif
Other DBs
NCBI-ProteinID:
AJP45678
LinkDB
All DBs
Position
205652..206131
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AA seq
159 aa
AA seq
DB search
MHDRIPWKQYFMMQALVIAQRSTCNRALVGSVLVKDNRIIGTGYNGSVSGQPHCDEVGHQ
MVDGHCVRTIHSEMNAIIQCAKFGVSTDGTEIYVTHFPCYNCCKSLLQAGIKKINYYFDY
RDNPLAMKLLHDCGVPYEQIKIDRKYVEGLAHKLEEDEN
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgcacgatcgaatcccttggaaacaatattttatgatgcaggcactggttattgcccaa
cggtcaacttgtaatcgggcgttagtaggtagcgttttagttaaggataatcgcatcatt
gggacaggttataatggctctgtttcaggtcaacctcactgtgatgaagtaggccatcag
atggttgatgggcactgcgttagaactattcattcagagatgaatgcaattattcaatgt
gcaaaatttggtgtttcaacagatggtactgaaatttatgtaacgcattttccttgctat
aattgctgtaaatctttacttcaagcaggtattaaaaagataaactattattttgactat
cgcgataatccattagcaatgaaactgcttcatgattgcggggtaccatatgaacaaatt
aagatcgatcgaaaatacgtggaaggcttggcccataaacttgaagaagacgagaattaa
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