Lactobacillus acidophilus FSI4: SD55_0311
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Entry
SD55_0311 CDS
T03681
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
laf
Lactobacillus acidophilus FSI4
Pathway
laf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
laf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SD55_0311 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
laf03021
]
SD55_0311 (rpoA)
03400 DNA repair and recombination proteins [BR:
laf03400
]
SD55_0311 (rpoA)
Enzymes [BR:
laf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SD55_0311 (rpoA)
Transcription machinery [BR:
laf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SD55_0311 (rpoA)
DNA repair and recombination proteins [BR:
laf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SD55_0311 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF961
Motif
Other DBs
NCBI-ProteinID:
AJP45779
LinkDB
All DBs
Position
303146..304084
Genome browser
AA seq
312 aa
AA seq
DB search
MIEFEKPNITVVEQEDSYGKFVVEPLERGFGTTLGNSLRRVLLTSIPGTGLVYVQIDGVL
HEFSTVPGVREDVTKIILNLKKLELKSLSDEQKVIELDVEGPATVTADDLKVDADVQVLN
PDQYICTIAEGGHLHMELAVKNGRGYVAASDNKSDDMPIGVIPVDSLFSPIKKVNYQVES
TRVGKRDDFDKLTFEIWTDGSIKPNDALSFAAKILVEHFKVFESADANTKFSEVMVEKED
DKKEKKLEMTIEELDLSVRSYNCLKRAGINTLQELTDKTESDMMRVRNLGRKSLEEVKNK
LTDLGLSLRQED
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgattgaatttgaaaaaccaaatattaccgttgttgaacaagaagattcttacggtaag
tttgttgttgaaccacttgagcgaggctttggtactactttaggtaattctttaagaaga
gtattacttacttctattccgggtactggacttgtttatgtgcaaattgatggcgtttta
cacgagttctcaacagttcctggcgttagagaagatgtaaccaaaatcattttgaattta
aagaagcttgaattaaagtctctttcagatgaacaaaaggttattgaattagacgttgaa
ggtcctgccacagtgactgctgatgatcttaaagttgatgcagatgttcaagtcttaaat
ccagatcaatatatttgtaccattgctgaaggtggacacttgcacatggaactcgccgta
aaaaatggtagaggatacgttgcagcaagtgacaataagagtgatgatatgccaatcgga
gtaattcctgttgattctctattctcaccaattaaaaaggttaattaccaagttgaatca
actcgtgttggtaagagagacgattttgacaaactcacttttgagatttggactgacggt
tcaatcaagcctaatgacgcccttagttttgctgctaaaattttagttgaacatttcaag
gtgtttgaatcagctgatgcaaatactaaattcagcgaagtaatggtggaaaaggaagac
gataagaaagaaaagaagctcgaaatgacaattgaagaacttgatctttctgttcgttca
tataactgcctgaaacgtgctggcattaacactcttcaagagttgactgataagacagaa
tcagatatgatgcgtgtacgtaacttaggacgtaaatcattggaagaagtaaagaataaa
ttaactgacttaggtctttcacttcgtcaagaagactag
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