Lactobacillus acidophilus FSI4: SD55_0553
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Entry
SD55_0553 CDS
T03681
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
laf
Lactobacillus acidophilus FSI4
Pathway
laf03420
Nucleotide excision repair
laf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
laf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SD55_0553 (pcrA)
03430 Mismatch repair
SD55_0553 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
laf03400
]
SD55_0553 (pcrA)
Enzymes [BR:
laf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SD55_0553 (pcrA)
DNA repair and recombination proteins [BR:
laf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SD55_0553 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
SD55_0553 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
ResIII
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
AJP45975
LinkDB
All DBs
Position
515648..517888
Genome browser
AA seq
746 aa
AA seq
DB search
MSEKSILANLNPQQKKAVETTEGPLLVVAGAGSGKTSVLTRRIAYLVEENNVAPWNILAI
TFTNKAASEMREREQDLLGPAAENIWMSTFHALCVRILRRDADKINYDHNFSIADSAEQL
TLVKHIEKDLNINPKMYDPRGVLSAISNGKNDLLDPDAFEASASSPFEKMTAKIYKEYQR
RLRRDQIMDFDDLIMQTLVLFKKSPETLQYYQDKFRYILVDEYQDTNQAQYELCHSLAAK
HKNICVVGDADQSIYGWRGANMENIMNFEQDYKKDGVKTVKLEQNYRSTGHILSAANSVI
KNNQNRKAKNLWTDQGDGQKITYYQAQSGDDEAHYIISKIKKEVEDKKRSYKDFAILYRT
NAQSRTVEEAFVKSNIPYQIVGGHKFYDRKEIKDIMAYLKLVANPADTMSMNRIINTPKR
GIGAATVDKLLTFADENNYTALDAMEHVAESTISTRAAKKLNDFGIKLRDAIAYAQIHGV
TGLTEKILEDFDYTEALRRENTIEAETRLENLDEFLTVTKRFDDHYEPEDDDSNPLSDFL
AEVSLLSDQDDIDDDGNQVALMTLHAAKGLEFPVVFLIGMEDGLFPLQRAMMDDNELEEE
RRLAYVGITRAKQELFLTNAYSRMMYGRTQNNPASRFLDEIEPKDIQKEANEKLQNSFIQ
SHYQTAPFANRAERARAEVYTAKKATGAVGAEKKGWNVGDQVEHKAWGHGVVTKVSGSGE
DMELDIAFNGKGIKRLLAAFAPIKKV
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaaatctatcttagctaacttaaatccgcaacagaaaaaagccgttgaaact
actgaaggaccgcttttagtagttgctggggcgggttcgggtaaaacttcagttttaaca
agacgaattgcttacttagttgaagagaataatgttgcaccatggaatattttggccatt
accttcaccaataaagcagctagtgaaatgcgtgagcgtgaacaagatttgctaggacct
gctgctgaaaatatttggatgtcaactttccatgctctttgtgtaagaattttacgtaga
gacgctgataagattaattacgatcataacttttcaattgccgattcagctgaacaattg
acgttagttaagcatattgaaaaggatttaaatattaatcctaagatgtatgatccacga
ggcgttttgtctgcaatttctaatggtaagaatgatttgcttgatccggatgcttttgaa
gcaagtgcatcttcaccttttgaaaagatgacggctaaaatttataaagaatatcaaaga
agactccgtagagaccaaatcatggactttgacgatttaatcatgcaaactttggtttta
tttaaaaagagcccagaaactttacaatactatcaagataaattccgctatattttagtc
gatgaatatcaggatactaaccaagcacaatatgaattgtgtcattcattagcagctaag
cataagaatatttgtgtggttggggatgctgaccagtctatctatggttggcgtggtgca
aatatggaaaacatcatgaattttgaacaagactacaaaaaagatggtgttaaaactgtt
aagcttgaacaaaattaccgttcaactgggcacatcttgtcagctgctaactcagttatt
aaaaataatcaaaatcgtaaagctaagaatttgtggactgatcaaggtgatggccaaaag
atcacatattatcaagctcaaagcggcgatgatgaagcacactacattatttctaaaatt
aaaaaagaagtagaagataagaaacgttcatataaggacttcgcaatcctttaccggact
aacgctcaatcacgtacagtcgaagaagcttttgtaaaatccaatattccttatcaaatt
gtcggtggacataaattctacgatcgaaaagaaattaaagatattatggcctacttaaag
ctagtggccaatccagcagatacgatgagtatgaaccgtattatcaacactcctaagcgg
gggatcggtgctgcaacagtagataaattgttaacttttgctgatgaaaataactatact
gcactagacgcaatggagcatgtggctgaaagtacaattagtactcgtgctgctaaaaaa
ttaaatgattttggtattaagttaagagatgcaattgcttatgctcaaattcatggcgta
actggtttaacagaaaaaattttagaagactttgattatactgaggctttaagaagagaa
aatactattgaagctgaaactcgtcttgaaaacttggacgaattcttaacagtaactaaa
cgttttgatgatcattatgaaccagaagatgatgattccaatccattgagtgatttctta
gctgaagtatcattactaagcgatcaagatgatattgacgatgatggcaatcaagtggct
ttgatgactctgcacgcagctaagggtctagaatttccagtcgtctttttaattggaatg
gaagatggtttattcccgcttcaacgcgctatgatggatgacaatgaactggaagaagaa
cggcgtttagcttatgtaggcattacccgtgctaagcaagagctattcttaactaatgca
tattcacgaatgatgtatggtagaacgcaaaataacccagcttcacgctttttagatgaa
attgaacctaaagatattcaaaaagaagcaaatgaaaaattacaaaatagctttattcaa
tctcattatcaaactgcaccatttgccaatagagcggaaagagctcgcgcagaagtttat
actgctaaaaaggcaactggagcagttggagctgaaaagaagggctggaatgtcggcgat
caagtagagcataaagcttggggtcacggcgttgttactaaagttagcggaagcggagaa
gatatggaattagatattgcttttaatggcaagggaatcaagagacttcttgctgctttt
gcaccaattaaaaaggtataa
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