Lactobacillus acidophilus FSI4: SD55_0813
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Entry
SD55_0813 CDS
T03681
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
laf
Lactobacillus acidophilus FSI4
Brite
KEGG Orthology (KO) [BR:
laf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
laf03009
]
SD55_0813
Enzymes [BR:
laf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
SD55_0813
Ribosome biogenesis [BR:
laf03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
SD55_0813
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
DUF211
Motif
Other DBs
NCBI-ProteinID:
AJP46214
LinkDB
All DBs
Position
774539..775249
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AA seq
236 aa
AA seq
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MRIDKYLANMNVGSRKEVHQLIKKGLVDVNGKTVKTPKEKINEDDVVTVNGEKVAYQKYH
YFLLNKPTGVLSATEDRSQKTVISLLKPEDRYQGIAPVGRLDKDTTGLLLLTNDGQLNHE
LLAPNKHVAKVYRAQIAGVADDETVKTFASGMTLGDGTKLKPAKLRILKQDRENATSEIE
IEISEGKYHQIKRMFGAVGMKVMALDRLAMGKLCLPADLKRGKYVELSLDEIENVK
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgagaattgataaatatttagccaacatgaatgttggttcaagaaaagaagttcatcaa
ttaatcaaaaaaggcttagttgatgttaatggtaaaactgtaaaaacaccaaaagaaaaa
attaatgaagatgacgttgttactgtaaatggtgagaaagtagcttatcaaaagtatcat
tactttttgttgaataaacctacaggcgtgctatctgcaacggaagatcgaagtcaaaag
acagttatttcattacttaagcctgaagatcgttatcaaggaatagcccctgtgggtagg
ttagataaagatacgacgggcttgcttctgttgactaatgatggtcaattaaatcatgag
ttgttagcacctaacaaacatgttgcaaaagtttatcgagcgcaaattgcgggtgtagcg
gatgatgaaactgtaaaaactttcgcatcgggtatgacactgggcgatggaactaagtta
aagcctgctaagttgaggattttaaagcaggatagagaaaatgctacttctgagattgaa
attgaaatatctgaaggaaagtatcaccaaattaaaagaatgtttggtgcggtagggatg
aaagttatggcattggatagattagcgatgggaaagttatgtttgccagctgatctgaaa
cgcggaaaatatgttgagcttagcttagatgaaatagagaatgtaaagtga
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