Lactobacillus acidophilus FSI4: SD55_0848
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Entry
SD55_0848 CDS
T03681
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
laf
Lactobacillus acidophilus FSI4
Pathway
laf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
laf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SD55_0848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
laf03400
]
SD55_0848
Enzymes [BR:
laf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SD55_0848
DNA repair and recombination proteins [BR:
laf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SD55_0848
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
WHD_MCM4
SLFN-g3_helicase
Herpes_Helicase
RsgA_GTPase
nSTAND3
DEAD
WHD_MCM3_C
AAA_22
AAA_12
AAA_5
AAA_23
AAA_28
AAA
AAA_29
NTPase_1
UvrD-helicase
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AJP46248
LinkDB
All DBs
Position
806314..808668
Genome browser
AA seq
784 aa
AA seq
DB search
MVEFTGRINGIVFENDKDLYKILDVEIIGSLENYSRDEIKVIGNFGDIQIGSSYRFDGKL
VMHEKFGLQFRASSYKQVLPHEEGSLTKYLSSDKFPGIGKKAANTIIDELGLNALDILKE
SPAKIDTLSLTSKQKDSLLSGLNTMDSYSEIVLKLAKYGINKRVAGKVYQLYHGDSLAKL
EKDPYVAVNEVAGFGFKTADTLGKQLDIRLDDPRRIKGAIYQVLLDALNGEGNTYVTLAD
LLTQANELLQIEQFDPIANCINELQEQGKVVVSGDTAALQNIFQTEIDIARSMKNLVQNQ
ALQENESYDDAEIEAAIEDAEDKLKIKYDGTQKLAIKNALKNPISILTGGPGTGKTTIIN
GILLALRKLAEIPAAALYSDNPPFLLAAPTGRAAKRMGEITEISAKTIHRMLGLGIGDID
TSELNELNGEILIIDEMSMVDMFLFRQLLSSINQVKHIVFVGDKDQLPSVGAGNVFSDLI
KSGAFPTAILKQIHRQGDDSTIIALAHDVNEGKDEQALFKKTKNYSFISCRPELVGDAVG
QIVELALKRGFAKDDIQVLGAMYHGNGGVNNLNDIIQDIMNPPKAKSKSIEVHNEIFRIG
DRILQLQNNPEKDIYNGQIGKIISIDENNSQKCMVANFDDREITFSKKDMNDITRAYAIT
IHKSQGSEFPLVVLNLTMQNFVMLKRNLLYTAITRAEKNLVLVGDSRAFLAAFKTAGNDR
KTGLSEKICEQLDIKTKNTSDEDEKVKEKESTEVKKESEDYILTPDKIYSGEIDPMIGMI
DIKL
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaatttaccggtagaattaacgggatcgttttcgaaaacgacaaagatttatat
aaaattttagatgtagaaattattggttcgcttgaaaattattcacgtgatgaaataaag
gtaatcggtaattttggtgatattcaaattggaagtagttatcgctttgatggtaagctg
gttatgcatgaaaagtttggcctacaattcagggccagcagttataagcaagtcttacca
catgaggaaggctctttaacaaagtatttaagctctgataaatttccaggtattggtaaa
aaagcagctaatactattatcgatgaattaggattaaatgctttagacattttaaaagaa
agcccagctaaaatagataccctgtctttaacaagtaagcaaaaagatagtttattatct
ggactgaatacaatggattcatattcggaaatagtattaaaactagctaagtatgggatt
aataaacgagttgcaggtaaagtgtaccagctctatcatggcgatagtttagctaaacta
gaaaaagatccctatgtggcagttaatgaagttgcaggttttggttttaaaacagctgat
actttaggtaaacagttagatatcagactggatgatcctcgaagaataaaaggggctatt
tatcaagtattgctagatgcattgaatggtgaaggaaatacttatgtaactttagcagat
ttattaacgcaggctaatgaattactacagattgaacaatttgatccgattgctaactgt
ataaatgaattgcaagaacagggaaaagttgttgtcagtggagatactgctgctttacaa
aatatctttcagactgaaatagatattgctcgttcaatgaaaaatttggttcaaaaccaa
gctttgcaagaaaatgaaagttatgatgatgcagaaattgaagcagcgattgaagatgct
gaagataaactaaaaattaaatatgatggtacacaaaaattagcaattaagaatgctctt
aagaatcctatttcaattttgacaggtggacctgggaccggtaaaactactattattaat
gggattttgttagcattaagaaaattggctgaaatacctgctgctgcattgtatagtgat
aatccaccattcttattggctgcccctacgggaagagctgccaaaagaatgggtgagatt
actgaaattagtgctaagacaattcaccggatgttgggtttaggtattggtgatatagat
actagtgaattaaatgaattgaatggtgaaattttaattattgatgaaatgtcaatggtt
gatatgttcttgtttagacaattattatctagcattaatcaggtgaaacatattgtcttt
gtaggtgataaagatcaattaccatctgttggagcagggaatgtttttagtgatttaatt
aaatcaggtgcgtttcctactgctattttgaaacaaattcatagacaaggcgatgattca
actattattgctttagcccatgatgttaatgaaggtaaggacgagcaggctctatttaaa
aaaacaaaaaattattcattcattagctgccgccctgaactggtgggggatgcagtaggt
caaatcgtagaattagcattaaaacgtggatttgctaaagatgacattcaagttttagga
gcaatgtatcatggaaatggtggagtaaacaatttaaacgatattattcaagatattatg
aatccaccaaaagctaagagtaaatctattgaagtccataatgaaatttttagaattgga
gatagaattttacagttacaaaataatccggaaaaagacatttataacggtcaaatcggt
aaaattatcagtattgatgaaaataattcccaaaaatgtatggtagctaattttgatgat
cgtgaaataacttttagtaaaaaagatatgaatgacataactagagcatatgcaattact
attcataaatctcagggctcagagttcccattggttgttttaaatttgaccatgcaaaat
ttcgttatgcttaaacgtaatcttttgtatacagcaattacacgtgctgaaaaaaatcta
gtacttgttggcgattcccgtgcttttttagctgcttttaaaacagcaggaaatgatcga
aagactggtttatcggaaaaaatttgtgagcaacttgatattaaaacaaaaaatactagt
gatgaagatgaaaaagtaaaagaaaaagaaagtactgaagtgaaaaaagaaagtgaagat
tatattttaacgcctgataagatatattctggtgagatcgatccaatgattggtatgata
gatattaagttgtaa
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