Lactobacillus acidophilus FSI4: SD55_1249
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Entry
SD55_1249 CDS
T03681
Symbol
truB
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
laf
Lactobacillus acidophilus FSI4
Brite
KEGG Orthology (KO) [BR:
laf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
laf03016
]
SD55_1249 (truB)
Enzymes [BR:
laf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SD55_1249 (truB)
Transfer RNA biogenesis [BR:
laf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SD55_1249 (truB)
Prokaryotic type
SD55_1249 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AJP46606
LinkDB
All DBs
Position
complement(1231557..1232450)
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AA seq
297 aa
AA seq
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MLNGIIVIDKDKGMTSADVVYHLRRALHIRKIGHAGTLDPEVTGVLPIAIGQATKLIELM
HTRPKKYQGTGLFGYATDSYDIDGKVLKEKRLVMPFTVEEIQRGMNTFKGKIEQVPPIYS
AVKVNGKHLYEYAREGIKVERPKRQVEIFQYDLLNDPSFDKEKGQESFDFEITCSKGTYV
RSLVNDLGEKLDEPAVMTYLRRVASSGFDISQAVKLSEIEANPEKASELIQPIDAFFKDY
ETIDLPEGKWLKVKNGAGISLETNAKKVALRYNEKVKAIYEKKGKIYRPSLMLLQNE
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatggaattatagtaattgataaagataaagggatgactagtgcagacgttgtc
tatcatttgcgtcgtgcattacatattagaaaaattggacacgcaggaactttggatcct
gaagttacaggtgttttgccaattgcaattggtcaggcaaccaagttaattgagttgatg
catactcgtcctaaaaagtatcaaggaacaggtttatttggatatgcgacagattcttat
gatattgatggtaaagttttaaaagaaaaaagattggtaatgccatttactgtagaagaa
attcagagaggaatgaatacttttaaaggtaaaatcgagcaagtcccaccaatttattct
gctgtaaaagtaaacggaaaacacctttatgagtatgcacgtgaaggaattaaagtggaa
cgtccaaaacgtcaagtagagatttttcaatatgatttgttaaatgatcctagttttgat
aaagaaaaaggtcaagaaagcttcgattttgaaataacttgtagcaaagggacgtatgtt
agatcattagttaatgatttaggcgaaaagctagatgagccagcagttatgacatacttg
cgacgagtggcaagttctggatttgatatttcacaagctgtaaaattaagtgaaattgaa
gcaaatcctgaaaaggctagtgaattgattcaaccgattgatgccttttttaaagattat
gaaactattgatttacctgaaggtaaatggcttaaagtaaaaaatggtgctggcatttct
ttggaaacaaatgcaaaaaaagtggcattacggtacaatgaaaaagttaaagcgatttat
gagaaaaaaggaaagatttatcgtcccagcttaatgctgcttcaaaatgaataa
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