Lactobacillus acidophilus FSI4: SD55_1589
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Entry
SD55_1589 CDS
T03681
Name
(GenBank) 3'-5' exonuclease
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
laf
Lactobacillus acidophilus FSI4
Brite
KEGG Orthology (KO) [BR:
laf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
laf03019
]
SD55_1589
Messenger RNA biogenesis [BR:
laf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SD55_1589
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
MIB_HERC2
Motif
Other DBs
NCBI-ProteinID:
AJP46899
LinkDB
All DBs
Position
complement(1581072..1582049)
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AA seq
325 aa
AA seq
DB search
MLKRLLDYNDGEEMDIVVLIKNSQLRRNKKDKLFLAMQFGDGSGEIRGNYWDASHQDAAT
FSTGTIVELNGKREEYQGRPQIRIYSLRVVGPQEGYSLDEFIKSAPETTNDMKGEIDDFV
KQIQNRTWRSIVEYLLKKWDKRFFDYPAGKSNHHALRGGLAYHTLAMLKDARGLADNYEQ
INRSLLYAGCILHDMGKVQELTGPAATQYTIEGNLVGHLVLIDEQIMLAAQDLKIDLESE
DLLLLRHMVLSHHGKFEYGSPKLPALLEAEILHRIDDLDAMVYAVTNALQHTGKGTFTEP
LQSQDGKRYYRPKNDPELDQAKNLE
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaacgtttgctagactataatgatggcgaagaaatggatatcgttgttttaatc
aaaaattcacagttgcgccgtaataaaaaagataaactttttttagcgatgcaatttggt
gatggctcaggtgaaattcgcggaaattattgggatgcgagtcatcaagatgcggcaact
tttagcactggtacgattgtagagttaaatggaaaaagagaggaatatcagggtagacca
caaattagaatatatagtttgcgtgttgttggaccacaagagggatattcacttgatgaa
tttattaaatcagccccagaaaccactaatgatatgaagggcgaaattgatgactttgtt
aagcaaattcaaaatagaacatggagaagtattgtagagtacttacttaaaaaatgggat
aaacgtttctttgattatcctgctggaaaaagtaatcaccatgcattgcgaggaggactc
gcatatcatactttggctatgcttaaagatgctagaggcttagctgataattatgaacag
attaaccgatcattactttatgcgggatgtattttgcatgatatgggtaaggtacaggaa
ttaaccggacctgctgcaacgcagtatacaattgagggcaatctggttggccatcttgtt
ttgattgatgaacaaataatgttagcagctcaggatttgaagattgatcttgaatctgaa
gatttgttattacttagacatatggttttatcacatcatggtaaattcgaatatggttca
cctaagttgccagcgttgcttgaagcagagattttgcaccgtatcgatgatttagacgca
atggtttatgcagtaactaatgcactgcaacatactggtaagggtacatttactgaacca
ttacaaagtcaagatggtaaaagatactatagacctaaaaatgatcctgaattagatcaa
gcgaagaatttggaataa
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