Lactobacillus acidophilus FSI4: SD55_1645
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Entry
SD55_1645 CDS
T03681
Name
(GenBank) metallo-beta-lactamase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
laf
Lactobacillus acidophilus FSI4
Pathway
laf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
laf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SD55_1645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
laf03019
]
SD55_1645
Messenger RNA biogenesis [BR:
laf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SD55_1645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
RMMBL
Lactamase_B
Motif
Other DBs
NCBI-ProteinID:
AJP46945
LinkDB
All DBs
Position
complement(1660937..1662232)
Genome browser
AA seq
431 aa
AA seq
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MTLKDKTTVTFYNGLTTIGGPMIEVAYNKSHVLFDLGEVYRPELNLPDESYQTLIKNELI
GDVPNFYDPQITGKPIDTERWEHSAAYISHLHLDHSKALNLLAPEIPLYAGPITAHLLPA
LNENGDFLLPAAGHDKNYTRPIIAAEYKKPINVGDITLEIYPSDHDAYGATGLIIKTPDK
QIAYTGDIRLHGYHPDWVRDFMKASKGSDMLIIEGTGVSWPEEKHDENSEEFTGPKNEVE
LTEEIVRLQNANPERQITFNTYPTNVERILRIISDSPRKVVLHAKRAHLIKESLKEDYPY
YYLPDDQRYEDLNPELEVDYDQLLADKSKYLWQAVSDYDKLQKGGLYIHSNAEPLGDFDP
AYKPFVEQFAKNNIEFKALRCSGHADEGELKEIIGGIQPAVLVPVHTLHPELEENPFGER
ILPKRGQTVTL
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaccttaaaggataagacaactgttactttttataatggtttgaccacaattggcgga
ccgatgattgaggtagcttataataaatcacatgttttatttgatctaggcgaagtatat
cgtcctgaattgaatttgcctgatgaaagttatcagacattgattaaaaatgaattaatt
ggggatgtacctaacttttatgatccacaaattacgggaaagccaattgatactgagcgc
tgggaacattctgcagcttatatttcacacttacacctggatcatagcaaggcgctaaac
ttattggctccagaaattccactttatgcaggtccaatcactgctcatttacttcctgca
ttaaatgaaaatggtgacttccttttaccggctgctgggcatgataagaactatactcgt
ccaattattgcggctgagtataaaaagccaattaatgtgggggatattaccctggaaata
tatccaagcgatcacgatgcttatggtgctacaggcttgattattaaaactcctgataag
cagattgcttatacgggtgatattcgccttcatggctaccatccggattgggtacgtgac
tttatgaaggcgtctaagggtagcgatatgttaatcattgaaggaaccggtgtttcttgg
ccagaagaaaagcatgatgaaaatagtgaggaattcactggtcctaaaaatgaagtggaa
cttactgaagagatagtccgcttgcaaaatgctaaccctgaacgtcagatcacttttaat
acttatccaactaatgtagaaagaatcttgagaattatctctgattcaccaagaaaagtg
gttttacatgctaagcgtgcccatctaattaaggaaagcctcaaagaagactatccttat
tattacttgccagatgatcaaaggtatgaagatttaaatcctgaacttgaagtggattac
gaccaacttttagcagataaatcaaaatacttatggcaagcagtaagcgactatgataag
cttcaaaagggtggactttatatccactcaaatgcagaaccattaggtgattttgaccct
gcatacaagccatttgtagagcagtttgctaaaaataatattgagttcaaggcgcttcgc
tgttcaggtcatgctgatgaaggagaactcaaagaaattattggcgggattcagccagct
gttttggtaccggtgcacacactgcatccggagctggaagagaatccatttggagaacgg
attttacctaaacgtggccaaactgtcacgctttag
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