Lactobacillus acidophilus FSI4: SD55_1964
Help
Entry
SD55_1964 CDS
T03681
Symbol
trmE
Name
(GenBank) tRNA modification GTPase
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
laf
Lactobacillus acidophilus FSI4
Brite
KEGG Orthology (KO) [BR:
laf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
laf03016
]
SD55_1964 (trmE)
Transfer RNA biogenesis [BR:
laf03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
SD55_1964 (trmE)
Prokaryotic type
Methyltransferases
SD55_1964 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
GTP_EFTU
Ras
MMR_HSR1_Xtn
Roc
Tyr-DNA_phospho
AAA_22
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AJP47249
LinkDB
All DBs
Position
complement(1988893..1990278)
Genome browser
AA seq
461 aa
AA seq
DB search
MAQVLTEFDTIAAISTPIGEGGISIVRMSGEDAIKIANEVFKGADLAQVPTHTIHYGHII
DPDTGKTIDESMVTVLRAPKTFTCEDIVEINCHGGIVVTNHILQLLLKHGARMADPGEFT
KRAFVNGRIDLTQAESVMDIVRAKTDKARQVAVSQLEGGLLHKIRTMRQEILDTLANVEV
NIDYPEYDADTVTANQMADTAKSVIEKIDRLLKTAQEGKILRNGLATAIVGQPNVGKSSL
LNYLTQSDKAIVTDVAGTTRDTLEEYVSVKGVPLELIDTAGIHHTDDKVEKIGVERSKKA
LERADLVLLLIDASKELTAEDKSLINETDSKKRIIILNKSDLGQKITVEQMKKLTGSEVI
STSILKEDNMDELEELINKLFFAGIENSNDQVMVTNQRQTSLLHKAKSELEDVIQAVDDG
IPVDIAQIDFTGAWDTLGEITGESAPDELITQLFSQFCLGK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggttttaacagaatttgatacaattgcagcaatttcgactcctattggtgag
ggtggaatctccattgttcgaatgtccggtgaagacgcgattaaaattgctaatgaagtt
tttaagggtgcggatttggcccaagtgccaacacatacgattcattacggtcatattatt
gatcctgatactggaaaaactattgatgaatcaatggtaacagtattgcgcgcgcctaag
acttttacctgtgaagatattgtggaaatcaactgtcatggtggtattgtggttactaac
catattttgcagcttcttttgaaacatggtgcacgaatggccgatccaggcgaatttact
aaaagagcatttgttaatggaagaattgacttaactcaagcagaaagtgtaatggacatt
gttcgcgctaagactgataaagcacgtcaagttgcagtaagccagcttgaaggtggactt
ttgcacaagatacgcacaatgcgtcaagaaatcttagatacgcttgctaatgttgaagtt
aacattgattatccagaatatgatgcagatacagttactgccaatcaaatggctgataca
gctaaatcagtaattgaaaaaatagatcgcttattaaagacagctcaagagggaaaaatt
ttacgcaatggcttagcaacagctattgtaggtcagcctaatgtaggaaaatcatcatta
ttaaactatttgacacaaagtgataaagcaatcgtaactgatgtggcaggtacaactcga
gatacactagaagaatatgtatctgtaaaaggagtaccactggaattaattgatacggca
ggtattcaccataccgatgataaagttgaaaagattggtgtggaaagatctaagaaagct
ctagaaagagctgatcttgttctcttgttgatagatgcaagtaaagaattaacagctgag
gataagtcactgattaatgaaaccgattccaaaaaacgaattattattttgaacaagtcc
gacttaggtcaaaaaataactgttgaacaaatgaaaaaattaacaggtagcgaagttatt
tccacttcaattttgaaagaagataatatggatgaacttgaagaattaattaataagtta
ttctttgcagggattgaaaattctaatgatcaagtaatggttactaatcaacgacaaact
tcacttttgcacaaggcaaaaagtgaattggaagatgttattcaagctgtggatgatgga
atacctgtggatatcgctcagattgatttcactggcgcgtgggatacattaggagaaatt
acgggtgaaagtgcaccggatgagttaataacacaattatttagtcaattctgtttagga
aagtag
DBGET
integrated database retrieval system
