Vibrio anguillarum M3: N175_00705
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Entry
N175_00705 CDS
T02823
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
lag
Vibrio anguillarum M3
Pathway
lag00300
Lysine biosynthesis
lag00470
D-Amino acid metabolism
lag01100
Metabolic pathways
lag01110
Biosynthesis of secondary metabolites
lag01120
Microbial metabolism in diverse environments
lag01230
Biosynthesis of amino acids
Module
lag_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
lag00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
N175_00705
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
N175_00705
Enzymes [BR:
lag01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
N175_00705
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AGU56425
LinkDB
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Position
1:complement(140516..141769)
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AA seq
417 aa
AA seq
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MDYFNYQDDGQLWAENVALTELAEQYGTPLYVYSRATLERHWHAFDKSVGEHPHLVCYAV
KANSNLGVLNTLARLGSGFDIVSAGELERVVVAGGDPAKVVFSGVGKTEAEMKRALELKI
KCFNVESEPELARLNKVAGELGVKAPISLRINPDVDAQTHPYISTGLRDNKFGIAFDRAL
DVYRLAQSLENLSIHGIDCHIGSQLTAIAPFIDATDRLLALIDQLKEEGITIKHLDVGGG
LGVVYRDELPPQPSDYAKALLARLSNHQDLELIFEPGRAIAANAGVLLTKVEFLKHTEHK
NFAIIDAAMNDLMRPALYQAWQDIVPVVPRQGEALTYDLVGPICETGDFLGKDRSLVLDE
GDLLAVRSAGAYGFVMSSNYNTRTRVAEVMVDGAQTHLVRQREALSSLWALERILPE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
ttggattacttcaattatcaggacgatggtcagctttgggctgaaaatgtcgcattaaca
gagttggctgagcaatacggcacgcctttgtatgtctattctcgcgctactttagagcgt
cactggcatgcttttgataagtcggtaggcgaacaccctcatctggtgtgttatgcggtg
aaggctaactcaaacttaggcgtattaaacacgttggcgcgtttagggtcaggttttgat
attgtttcggcaggagagctagagcgtgttgtggtggcgggtggtgacccggcgaaagtg
gtattttctggcgtcggtaaaacggaagcggaaatgaaacgcgcgttggagctcaagatt
aaatgctttaacgttgaatccgagcctgaattagcacgtttaaataaagtggctggcgag
ctgggtgtcaaagcaccgatttcactgcgcatcaaccctgatgtggatgcacaaacccac
ccttatatttcaaccggtttgcgtgacaataagtttggtattgcttttgaccgtgcactg
gatgtttatcgcttggcacaaagcctagagaatctcagcattcacggtattgattgccac
attggctctcaactgaccgctattgccccttttattgatgcaaccgatcgcttacttgcg
ttaattgatcagcttaaagaggaagggatcaccattaaacatttggatgttggtggtggt
ttaggtgtggtgtatcgcgatgagttacccccgcagccttccgattatgccaaagccttg
ttggcgcgtttgagtaaccatcaagatctcgaactgatttttgaaccgggacgtgctatt
gcggctaacgcgggcgtgttgttgacgaaagtagagtttctcaaacataccgaacacaaa
aactttgccattattgatgcggcgatgaacgatttgatgcgtccagcgctttatcaagct
tggcaagatattgttcctgttgtgccgcgccaaggtgaagcgctaacctatgacttggtt
gggcctatttgtgaaaccggtgacttcttgggtaaagatcgttcattggtcttggatgag
ggagatctactggcggttcgctcagcaggagcttacggttttgtgatgtcttcgaactat
aatacacgtactcgcgtggcggaagtgatggtggatggtgcacaaacccaccttgttcgt
cagcgtgaagcactatcgagcctatgggcattagagcgtattctgccggagtaa
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