Vibrio anguillarum M3: N175_02070
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Entry
N175_02070 CDS
T02823
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-mannoheptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
lag
Vibrio anguillarum M3
Pathway
lag00541
Biosynthesis of various nucleotide sugars
lag01100
Metabolic pathways
lag01250
Biosynthesis of nucleotide sugars
Module
lag_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
lag00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
N175_02070 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
lag01005
]
N175_02070 (rfaD)
Enzymes [BR:
lag01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
N175_02070 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
lag01005
]
Core region
N175_02070 (rfaD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
ThiF
KR
Phage_T7_Capsid
adh_short
Shikimate_DH
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
AGU56628
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Position
1:complement(426384..427325)
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AA seq
313 aa
AA seq
DB search
MIIVTGGAGMIGSNIIKALNEQGISDILVVDNLKNGRKFKNLADLDIADYMDRDDFLVQI
MSGEDFGSIEAVFHEGACSATTEWDGKYVMLNNYEYSKELLHYCLERDIPFLYASSAATY
GDTDTFIEEKEYEGALNVYGYSKQQFDNYVRRIWQEAQTHGETLSQITGFRYFNVYGPRE
QHKGSMASVAFHLNNQMNAGENPKLFAGSETFQRDFVYVGDVAAVNLWFMNSGVSGIYNL
GTGNAESFQEVAKAVIKHHGKGDVETIPFPDHLKGAYQEFTEADLTKLRAAGCQHQFKTV
AEGVAEYMALINK
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgtaacgggtggtgctggcatgattggtagcaacattatcaaagcgctaaat
gaacaaggcattagtgatattcttgttgtcgataatttaaaaaatggtcgtaaattcaaa
aacttagccgatctggacattgccgattacatggaccgagacgatttcttggtgcagatc
atgtctggtgaggattttggttctatcgaagccgtatttcatgaaggcgcttgctctgcc
accacggaatgggatggcaagtatgtgatgcttaataactatgagtattctaaagagcta
ctgcactactgcttagagcgcgacattccatttttgtatgcttcatcagccgcaacctat
ggcgataccgataccttcattgaagaaaaagagtatgaaggtgcgctgaatgtgtatggc
tattccaagcagcagtttgataactatgtgcgccgtatttggcaagaagcacaaacacac
ggtgaaactctttcccaaattaccggttttcgttatttcaatgtctatggcccgcgtgaa
cagcacaaaggctcaatggcttctgttgcttttcatttaaataatcaaatgaatgcgggt
gaaaacccgaaactgtttgcaggtagtgaaaccttccagcgtgatttcgtttatgtgggc
gacgttgcggctgtgaatttatggtttatgaacagcggagtatccggtatttataacttg
ggtaccggcaacgcagaatctttccaagaagtcgctaaagccgttatcaaacaccatggt
aaaggtgacgttgaaaccattccattcccagatcacttaaaaggtgcgtaccaagagttc
actgaggccgatttaacgaaattgcgcgccgcaggttgccagcatcagtttaagacggtg
gctgaaggtgtggctgagtatatggcgttgattaataagtag
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