KEGG   Vibrio anguillarum M3: N175_05640
Entry
N175_05640        CDS       T02823                                 
Name
(GenBank) RNA polymerase sigma 70
  KO
K02405  RNA polymerase sigma factor FliA
Organism
lag  Vibrio anguillarum M3
Pathway
lag02020  Two-component system
lag02040  Flagellar assembly
lag05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:lag00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    N175_05640
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    N175_05640
  09142 Cell motility
   02040 Flagellar assembly
    N175_05640
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lag03021]
    N175_05640
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:lag02035]
    N175_05640
Transcription machinery [BR:lag03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     N175_05640
Bacterial motility proteins [BR:lag02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    N175_05640
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 HTH_23 HTH_10 UPF0122 Rv2175c_wHTH GerE MarR_2 UPF0175 HTH_Mga MarR Phage_terminase
Other DBs
NCBI-ProteinID: AGU57240
LinkDB
Position
1:1153431..1154165
AA seq 244 aa
MNKALTYDQHGNLKSQQAFLEKYSVLVKRIAHHLAGRLPPNVLVEDLIQAGMIGLLEAQK
NYDGSKGASFETYAGIRIRGAMLDDIRRGDWVPRSVHKHNREITHAISVLEGELNRNPTD
TEVAKYLGMSLDQYHTVLTDINCSRIVGIEDLGISDDAISPLDDDEDNSPFKGVADESFR
KALVESIKSLPEREALVLSLYYDEELNLKEIGEVLGVSESRVSQILSQSMQRLRTKLSSW
TQND
NT seq 735 nt   +upstreamnt  +downstreamnt
gtgaataaagcgcttacttatgaccaacacggaaacctaaagagccaacaagcattttta
gaaaaatactctgtattggttaagcgtattgcacaccatttagcaggtcgcctgccacca
aacgtattggtcgaagatctaatacaagccggtatgataggcctacttgaagcacaaaaa
aattatgatgggagtaaaggtgcaagctttgaaacctacgcaggaattcgaattcgtgga
gctatgctcgacgatattcggcgtggtgattgggttccacgctcggttcataaacacaac
cgagagataacccatgcaatttcagttctagaaggtgagctaaaccgaaacccaactgat
acagaagttgcgaagtatttaggcatgtcgctggatcagtaccatactgtattaactgac
attaattgctcacggattgtcggaatcgaagatttaggtatttctgatgatgcaatttct
cctctggatgacgatgaagacaactcgccatttaagggagtcgccgatgaatcgtttcgt
aaagcattggttgaatcaataaaatcacttccagaacgtgaagctttggtactttcgctc
tattatgatgaagagctaaacttaaaagaaattggtgaagttctaggtgttagcgaatcc
cgcgttagccagatactaagccaatctatgcagcgactaagaacgaagttaagttcttgg
acgcaaaatgactaa

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