Vibrio anguillarum M3: N175_10425
Help
Entry
N175_10425 CDS
T02823
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
lag
Vibrio anguillarum M3
Pathway
lag03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
N175_10425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lag03400
]
N175_10425
DNA repair and recombination proteins [BR:
lag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
N175_10425
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
N175_10425
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_22
UB2H
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
AGU58070
LinkDB
All DBs
Position
1:complement(2214307..2216430)
Genome browser
AA seq
707 aa
AA seq
DB search
MIYDATILNNYLQQNMANSENAYSVIEDNGIMSKTFELVSGYQPSGDQPTAIKQLFDGLD
AGLAHQTLLGVTGSGKTFTLANVIAKAQRPVILLAPNKTLAAQLYGEMKSFFPNNAVEYF
VSYYDYYQPEAYVPTTDTFIEKDSSINSHIEQMRLSATKALLERKDAIIVASVSAIYGLG
DPDSYLKMMLHVRRGDVMDQRDIIRRLAELQYTRNDMAFERGQFRVRGEVIDIFPAESDY
AAVRVEMFDDEVDCISLFDPLTGAMIQRDLPRYTIYPKTHYVTPRERIVDAIEHIKEELR
TRQAYLLENNKLLEEQRISQRTQFDIEMMNELGFCSGIENYSRYLSGRKEGEPPPTLFDY
LPHDGLLIIDESHVTVPQIGAMFKGDRSRKETLVEFGFRLPSALDNRPLKFEEFESLAPQ
TIFVSATPGNYELEKSAGQIVDQVVRPTGLLDPVLEVRPVATQVDDVLSEIRIRSAKDER
VLITTLTKRMAEDLTEYLHEHGVKVRYLHSDIDTVERVEIIRDLRLGEFDVLVGINLLRE
GLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNIEGKAILYADRITNSMKKAMDET
DRRREKQQAHNEEQGITPQALKRNVKDIMELGDITKSKQQRMNKQVPLSKVAESSQTYEI
FTPLQLEKEIAKLEGLMYKHAQNLEFELAAEKRDQIEKLRQQFITNS
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
gtgatttacgacgcaactattttgaacaattacttgcaacaaaacatggctaacagcgag
aatgcctattcagttatagaggacaacggcattatgagcaaaacgtttgaattggtatcg
ggctatcaaccctcaggcgatcaacctacggcgatcaagcaattgtttgatgggctagat
gcaggtcttgctcatcaaaccttattgggtgtgacgggttcagggaaaacattcaccttg
gctaatgtgatcgccaaggcgcagcgtccggttatcttgttggcaccgaataaaacgctc
gcagcccagctgtatggtgagatgaagtcatttttccccaataatgcggttgagtatttc
gtctcttattacgactactatcagccagaggcgtatgtgccgaccacggacacatttata
gaaaaagattcctcgattaactcacacatagaacaaatgcgactctccgcgactaaagcg
ctgcttgagcgtaaagatgcgattattgtagcttctgtatcggcgatttacggtttgggt
gatcctgattcttatctgaaaatgatgctgcatgttcgccgtggtgatgtgatggatcag
cgcgacattatccgccgtttagccgagctccaatacacacgtaacgatatggcgtttgaa
cgtggtcaatttagagttcgtggagaggtcatcgatatctttcccgcggaatcggattat
gcggccgtgcgtgttgaaatgtttgatgatgaggtagattgcatcagtttgtttgaccca
ttgacgggcgcaatgattcagcgagatcttcctcgctataccatctatcctaaaacgcac
tacgttacgccaagagagcgcattgtcgatgcgatagagcacatcaaagaggagctgcga
actcgccaagcctacctgttggaaaacaataaactactcgaagagcagcgcatatcgcag
cgtactcaatttgatattgaaatgatgaatgagctcggtttttgttcaggtattgaaaac
tattcacgttatcttagtgggcgaaaagagggagagccgcctccgaccctgtttgactat
ctaccgcatgacggtttattgattatcgacgaatcacacgtaaccgtgccgcaaattggc
gcgatgttcaaaggcgatcgttcacgtaaagaaacgttagtggagtttggtttccggttg
ccttccgctttagataaccgtccactaaagtttgaagagttcgaatcacttgcgccgcag
acgatttttgtttctgctaccccgggcaactatgagctagaaaaatcagccggacaaatt
gtggatcaagtggtgcgcccaaccggattactggaccccgtgctggaagtacgaccagtt
gcaacacaagtggatgatgtgttgtcagagatccgcattcgctcagcgaaagatgaacgt
gtgctgatcacgacattgactaaacgcatggctgaagacttaactgagtatcttcatgaa
catggggttaaggtcagatatctgcactcagatattgatactgttgagcgggttgagatt
attcgcgaccttcgcctaggcgaatttgatgtgttagtgggtattaacttactgcgtgaa
ggtttggatatgcctgaagtctctcttgtcgcaattcttgatgcggataaagaaggtttt
ctacgttcagaacgttcattaattcagaccattggccgtgcggcacgtaacattgaaggt
aaagcgattctctatgctgaccgcattactaactcaatgaagaaagcgatggatgagacc
gatcgtcgccgtgaaaagcagcaagcacataatgaagaacaagggataacacctcaggcg
ctgaaacgtaatgtcaaagatattatggagttaggtgatattactaagtccaagcagcag
aggatgaacaaacaagtacctttgtctaaggtggcagaaagctcgcaaacttatgaaata
ttcacgccgctacaactggaaaaagagatcgccaaactagaagggttaatgtacaaacac
gcacaaaacctagaatttgaattggctgccgaaaagcgtgaccaaattgaaaaactgcgt
cagcagttcattaccaacagttaa
DBGET
integrated database retrieval system
