Vibrio anguillarum M3: N175_12290
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Entry
N175_12290 CDS
T02823
Name
(GenBank) Fis family transcriptional regulator
KO
K20919
sigma-54 dependent transcriptional regulator, positive regulator of biofilm formation
Organism
lag
Vibrio anguillarum M3
Pathway
lag05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
lag00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
N175_12290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lag03000
]
N175_12290
Transcription factors [BR:
lag03000
]
Prokaryotic type
Helix-turn-helix
Other families
N175_12290
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VpsR
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA
AAA_22
AAA_16
HTH_29
AAA_13
HTH_22
HTH_7
AAA_5
AAA_14
AAA_2
HTH_17
HTH_IclR
HTH_50
HTH_Tnp_1_2
HTH_30
NB-ARC
Arf
Motif
Other DBs
NCBI-ProteinID:
AGU58361
LinkDB
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Position
1:complement(2605643..2606977)
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AA seq
444 aa
AA seq
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MGTQFRMDSVPGSLVVVGGTYEPWLSVLEQVGWRCTQCADLRKADALFAETGPCIGIVDL
SHDEFSLNGIANLVSNHKQVRWLAFIRESQLSSDTICQFIVNFCIDFFTAPIPDAQLLST
IGHQLGMLKLEKKVWPHYGATGDIGLIGESTPMKRLRDQIKRIGPTDVSILIYGENGTGK
ETVARAVHKTSSRAQKPFISVNCRALSESRFECELFGIGCEDSSQTSLLERADGGTILLK
DILTLPKSQQANLLRFLQEGTIETSTGVKEVDVRILAANSSDIEKALIDGNFNEELYHYI
NVLRINVPSLKERAGDIALLARHFLQEYSKEFNAQARSFTEEAARSLARYHWPGNVRELM
NQIKRVVLMSDSVMLDELQLDLPKRSDGKRSLKSIRERSERDALLLVLESNSGQVSMAAK
ELGVSRATMYRLLNKHNLITENTY
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgggcactcaattccgaatggattctgtccctggttcgcttgtcgtcgttggtgggaca
tacgagccttggttatctgtacttgaacaggttggttggcgttgtacacaatgcgcagat
ttacgtaaagcggatgccttgtttgcagaaacaggcccatgcattggtattgttgatttg
agccatgatgaattcagcctcaatggcattgcaaatttggtcagcaaccataaacaagta
cgttggttagcgttcattcgcgaatcacagttgagctcggatacgatttgccaattcatt
gttaacttttgtatcgacttttttacggcgccgattcccgatgcgcagctactgagcacc
attggacaccaacttggaatgcttaagttagagaaaaaagtatggccacattatggagca
acaggggatattggtttaattggtgagtccactcccatgaagcgcttgcgtgatcagatc
aaacgaatcggccctacagatgtcagtatcctcatttatggggaaaatggaacgggcaaa
gagacggtcgcgagagcggtacacaaaacctcatctcgcgcacaaaaaccttttatttca
gtgaattgccgagctttatcggagagccgctttgaatgtgagctgttcggtattggttgt
gaagactcatctcaaacttcattattggagcgggcagatggtgggacgatcctacttaaa
gatattctcacgctacctaaaagccaacaagctaacctcttgcgcttcctgcaagaagga
acgatagaaacttcaacgggtgtcaaagaggtggatgtgcgtattttggccgccaactct
tccgatattgaaaaagcgctgattgatggcaattttaacgaagagctgtaccactatatc
aacgtattgcgtattaatgtcccgagcttaaaagagcgggcgggtgatattgctttactg
gcacgacacttcttgcaggagtattcaaaagagtttaacgcgcaggcgcgcagttttact
gaagaagcggcgcgctcattggctcgttatcactggccgggtaacgttcgtgagctgatg
aatcagatcaaacgtgtggtgctgatgtctgattcagtcatgttggatgaattgcaactc
gacttaccaaaacgcagtgatggtaagcgcagcctaaaaagcattcgtgagcgctcagag
cgagatgcgctattactggttctagaatcgaactcagggcaagtatcaatggccgccaaa
gagctaggtgtatctagagctactatgtatcgcttgcttaataaacataacttaatcact
gaaaatacctattaa
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