Vibrio anguillarum M3: N175_12395
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Entry
N175_12395 CDS
T02823
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lag
Vibrio anguillarum M3
Brite
KEGG Orthology (KO) [BR:
lag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lag03016
]
N175_12395 (truB)
Enzymes [BR:
lag01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
N175_12395 (truB)
Transfer RNA biogenesis [BR:
lag03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
N175_12395 (truB)
Prokaryotic type
N175_12395 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AGU58381
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All DBs
Position
1:complement(2630006..2630956)
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AA seq
316 aa
AA seq
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MARRRKGRPINGVILLDKPTGISSNDALQKVKRIYFAEKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDSDKRYRVIAKLGERTNTSDSDGEVVETRPVNVQLNTLRECIERFRGETDQ
IPSMFSALKYQGRPLYEYAREGIDIPRESRKITVYDIELIRFEGDEVEMDVHCSKGTYIR
TIVDDLGEMLGCGAHVTMLRRTAVAKYPYEKMVTLEQLDALLQQALRDDVAPKNVLDSLL
MPMDSAVQDLPEVNLIPELADMVQHGQPVQVLGVPLDGTVRMTMGEEKLFIGVGEIDQDG
RVAPKRLVVFRDEESL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgtcgtaaaggtcgcccaatcaacggggtaattttactggataagccaacg
ggtatctcctcgaatgatgccttacaaaaagtaaaacgtatttattttgcagaaaaagcc
ggacacactggcgcgctcgatcctttggcaacaggaatgttgcctatttgccttggtgaa
gcgacaaaattctctcagtttttacttgattcagataagcgttatcgagtcattgcaaaa
ctgggtgagcgaaccaatacctctgattcagacggagaggtagtggaaacacgccctgtc
aatgtgcaattaaataccctgcgagagtgcatcgagcgttttcgtggtgaaaccgaccaa
attccgtcaatgttttctgcactgaaatatcaaggccgtcctctatatgaatacgctcgt
gaaggcattgatattccgcgcgaatctcgaaaaatcactgtctatgatattgaattgatt
cgtttcgaaggtgatgaagttgaaatggatgtgcactgttcgaaaggcacgtatatccgc
actatcgtggatgacttaggtgaaatgcttggttgtggcgcacatgtgaccatgctgcgt
cgtactgcggtcgcgaagtacccatatgagaagatggtgactttagagcaacttgatgca
ttgctgcaacaggcgctgcgtgatgatgtcgcaccgaaaaatgtgttggactcgttattg
atgccaatggacagtgcggtgcaagatttgccggaagttaaccttattcctgagttggca
gacatggtacaacatggccaaccagtgcaagtgttgggtgtgccacttgatggcacagtg
cgcatgaccatgggtgaagagaaactctttatcggtgtgggtgaaattgaccaagatggt
cgtgttgcgcctaagcgattggtcgtttttagagacgaagagtcgctttaa
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