Vibrio anguillarum M3: N175_14030
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Entry
N175_14030 CDS
T02823
Name
(GenBank) diguanylate phosphodiesterase
KO
K18765
RNase E specificity factor CsrD
Organism
lag
Vibrio anguillarum M3
Brite
KEGG Orthology (KO) [BR:
lag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lag03019
]
N175_14030
Messenger RNA biogenesis [BR:
lag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
N175_14030
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES4
GGDEF
Hrs_helical
Motif
Other DBs
NCBI-ProteinID:
AGU58622
LinkDB
All DBs
Position
1:complement(2965173..2967182)
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AA seq
669 aa
AA seq
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MKRNSAFMRYTPTLKLSTRLVAFVTLIVTSAMFILFIGGTLSFQRLGQEYLNHYLAGIVE
VVDKEIEDPDAAYSLQRWMPKMLQASSIVEMQLSSPAGVIYRFKDTSSKVDPARLYHIDI
ILERNPGYSISFKAVPPYLSYSYSLGAMWSITLAVGLIVFCLIRGVKWLKEQLLGSELLE
ERGRMILAGRVEQYAKGDHREWPYTASEALDVLIDELQDARQERSRFDTFIRTQTFLDKL
TGTANRVLFDSKLESALLENGARGGVLLVRIDDWDSLCEENDKKAADDLVVEVGENISNV
IQRYPDVILSRYYDTDFAIFVPHQGVKEVASIATQCLKLLARISPPEPLDKENWCHIGIS
MYSEGERRGRVLDEAETALKSAQLQRVNTWSRFKKSTFFQEERGSVRWRTLFDQVLTPEK
IILFRQPCYLLEKTNDLVWLHDELFARIDDPEQGVIKASRFHSALETVGYEMVMDRAVLL
QVVRLLKRSEVKVNVSVNLHVVPFADKSYFKWFRHELLQLTSSSRVLLSFEFPEGRLVQH
LDYMRPVIKMISGLGAKVVVGQAGRTIVSTHYIKDLKIDFLKLHRSLMKKIDQRHENQLF
VRSMIGACGGTQTQVIAVGVETEQEWQTLKNLGIHGGQGRLFEEEQPLLPEKIISPSVTL
GRRNRWRKK
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaggaattcagcattcatgcggtatacaccaacactgaaactgagtactcggtta
gtagcttttgttacgctcatcgtaaccagtgcaatgttcattttgtttattggtggaact
ttgtcttttcaacggcttggacaagaatatctcaatcactacctagcaggaattgtggag
gtagtcgataaagaaatagaagatcctgatgccgcttattcattgcaacgttggatgccc
aaaatgttgcaagccagtagcattgttgaaatgcagctctcttcaccagctggcgttatt
taccgttttaaagatacctcgtccaaagtcgaccctgcccgtttgtaccatattgatatt
atccttgaacgtaatccaggctacagcatcagctttaaagccgttccgccctatctcagt
tatagctactcattgggtgccatgtggtctattacgttggcagttggtctcatcgtgttt
tgtttgattcgtggggtaaagtggcttaaagagcaattgcttggatctgaattgttggag
gagcgagggcgaatgattctcgccggtcgagtggagcaatacgccaaaggtgatcaccgc
gagtggccttatacggcgagtgaggcgcttgatgtcctgattgatgagctgcaagatgct
cgtcaagagcgtagccgctttgatacttttatccggacccaaaccttcttagataagttg
acgggtacggccaaccgtgtcctttttgatagcaaattggaatcagccttgttagagaat
ggcgcgcgtggtggcgttttgttagtgcgtatcgatgattgggattctctgtgcgaagaa
aatgataaaaaagcagcggatgatctcgttgtggaagtcggggagaacatctctaacgtc
atacagcgttacccggatgtgattttatctcgctattacgataccgattttgccattttt
gtgccgcaccaaggggtaaaagaggtcgcttctattgctacacaatgtttgaagctttta
gcgcgcatatcgcctccagagccgctcgataaagaaaactggtgccatataggtatcagt
atgtacagcgaaggcgagcggcgtggtcgagtgttggatgaggcagaaacggccttaaaa
agtgctcagttacagcgagtgaatacgtggagccgctttaaaaagagtacttttttccaa
gaggaacgcggcagtgtgcgttggcgaactttgtttgatcaggtgctgacgcctgagaaa
ataattttattccgtcaaccttgctatttgcttgaaaagacgaatgatttagtatggctg
cacgatgagttgtttgcgcgtattgatgatccagaacaaggtgttataaaagcctctcgc
tttcattctgctttagaaactgtaggttatgaaatggtgatggatcgagccgtgttgctg
caggtggttcgtttgctcaaacgctctgaagttaaggtcaatgtgtcagtgaacttgcat
gtcgtcccattcgccgataagtcgtattttaagtggtttcgacatgaattgctgcaactg
acctcgagtagcagagtactgctatcctttgagtttccagaggggcgattagtacagcat
ctcgattatatgcgccccgttattaagatgatctccggcctcggtgctaaggtagtagta
gggcaggctggcagaacgattgtcagcactcactacataaaagatcttaagattgatttc
cttaagttacaccgcagtttgatgaagaaaatagaccaacggcatgaaaatcagctgttt
gttcgtagcatgatcggtgcttgtggcggtactcagactcaagttattgcggtcggtgtc
gaaacagagcaagagtggcaaacgctaaaaaacctaggcattcatggtgggcaaggccga
ctgtttgaagaagaacagcctttgttacctgagaaaataattagccctagcgtgacctta
gggcgaagaaatcgttggcgtaaaaaataa
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