Roseibium algicola: B0E33_00380
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Entry
B0E33_00380 CDS
T04723
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
lagg
Roseibium algicola
Pathway
lagg00190
Oxidative phosphorylation
lagg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lagg00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
B0E33_00380
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B0E33_00380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lagg03019
]
B0E33_00380
Enzymes [BR:
lagg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
B0E33_00380
Messenger RNA biogenesis [BR:
lagg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
B0E33_00380
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
RE_NgoFVII
GCFC
Motif
Other DBs
NCBI-ProteinID:
AQQ07034
UniProt:
A0ABM6I9B4
LinkDB
All DBs
Position
complement(85040..87262)
Genome browser
AA seq
740 aa
AA seq
DB search
MNEAPDLSDILPASTVASDAKGAVPELTPEGELATSPARFMNRELSWLQFNLRVLEEAMN
PNHPLLERVRFLSISANNLDEFFMVRVAGLRGQQRADVTNLSDDGLTPTEQLQKISEAVR
DLQASQQKIWVELRREIADKGIEIPQGDTLDQADKAWLQDYFLAYVFPVLTPLAIDPAHP
FPFIPNLGFSIVFELAPTSGGRGMIALLRIPSQVDRFVQLPNGEDGAARFIAIEKVVSLF
IGRLFPGYEIRGKGAFRVIRDSDLEIEEEAEDLVRLFESALRRRRRGSVIRLEIQETTPP
ALREFVGEALHVGQSEIFLANGLLALNNLSQIVDLERPDLKFQPYTARFPERIREHGGDC
LAAIHQKDIIVHHPYESFDVVVQYLRQAARDPDVVAIKQTLYRTSNDSPIVKALAEAAEA
GKSVTALVELKARFDEEANIKWARDLERAGVQVVFGFIELKTHSKLSMVIKREHGQLKTY
CHIGTGNYHPITARIYEDLSFFTDDPGIAEDAARVFNFITGYAQPAELNNLMVSPVNLRQ
RMLEMTENEIEHARAGRPAQIWWKMNSLVDPAIIDALYRASQAGVQIDLIIRGICCLRPG
IPGLSDNIRVKSIVGRFLEHSRIYCFGNGQGLPSPEAHVYIGSADLMPRNIDRRVEVLAP
LKTPTVHEQVLDQIMVANLKDNQQSWRILSDGSHERIVPNANEEPFNAHQYFMTNPSLSG
RGKSLKSDRPRPFLERQKRG
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagcccctgatctttcggacattctgcctgcctccaccgttgcttccgatgca
aagggagccgtgccggaactgacaccggaaggtgagctggctacatctccggccaggttc
atgaaccgggagctgtcctggctccagttcaatctccgggttctggaagaagccatgaac
ccgaaccatccgctgcttgagcgcgttcggttcctgtcgatctccgccaacaatctcgac
gaatttttcatggtgcgtgtggccggcctgcgtggccagcaacgggccgacgttaccaat
ctgtccgacgacggcctgacgccgaccgaacagcttcagaagatcagcgaagcagtgcgt
gatctccaggcgtcccagcagaagatctgggtggagctgcgccgggagattgccgacaag
ggtatcgagatcccgcagggcgacacgctcgaccaggcggacaaggcctggctgcaagac
tatttccttgcttatgtcttcccggttctgacgccgcttgccatcgatccggcgcatccg
ttcccgttcattccgaaccttggcttttccatcgtctttgaactggcgccaacttccggt
gggcgcggcatgattgctctgctcagaattccgagccaggttgatcgcttcgttcaattg
ccaaacggcgaagatggcgctgcccggttcatcgcaatcgagaaagtcgtcagccttttc
atcgggcgcttgtttccaggctacgagatccggggcaagggggcgttccgcgtcattcgt
gacagcgatcttgaaatcgaagaagaagcggaagacctcgtgcgtctgttcgaaagcgct
ttgcgccgccgccgccggggctcggtgatccgtctggaaatccaggaaaccacaccgccg
gcgttgcgtgagttcgtgggggaggcgctgcatgtcgggcaaagcgagatcttccttgca
aacgggttgcttgcgctcaacaacctgtcccagatcgtagaccttgagcggcctgacctg
aagttccagccctataccgcccgctttccggagcgcattcgcgaacatggcggcgactgt
ctggcggcgatccaccagaaggacatcatcgtccaccacccgtatgaatccttcgacgtt
gtggttcagtatctgcggcaggctgcgcgtgatccggatgtggtggcgatcaagcagacg
ctctatcgtacctccaacgacagccccatcgtgaaggctttggctgaggcggccgaagcc
ggcaaatccgttaccgcactggtggagctcaaggccaggttcgacgaggaagcgaatatc
aagtgggcgcgcgatctggagcgggcaggggtgcaggttgtcttcggcttcatcgagctt
aaaacgcactccaagctctccatggtcatcaagcgcgagcacggtcagctcaagacctat
tgccacatcgggacaggaaactatcacccgatcacggcgcggatttatgaggatctttcc
ttcttcaccgatgatcccggcattgccgaggatgcggcccgggtgttcaacttcatcacc
ggttacgctcaaccggcggaattgaacaacctcatggtgtctccggtcaacctgcgtcag
cgcatgctggaaatgaccgagaacgagatcgagcacgcccgcgcaggccgccccgcgcag
atctggtggaagatgaattccctcgtggatccggcgatcatcgatgccctttatcgcgca
agccaggcaggtgtgcagatcgatctgatcattcgcggcatttgctgcctgcgtccgggc
attccgggtctgtccgacaacattcgggtgaaatccattgtcggacgtttcctggagcat
tctcgcatctactgctttggcaacggccagggactgccgtctcccgaggctcacgtctat
atcggttcagccgatctgatgccgcgtaacatcgaccggcgggtcgaggtcctggcaccg
ctcaagacaccgaccgtgcacgaacaggttctggaccagatcatggtggccaacctgaag
gacaaccagcaaagctggcgcattctgtcggacggcagccatgagcgcatcgttccgaac
gccaatgaggaacccttcaatgcgcatcagtatttcatgacgaacccctcgctttccggc
agaggcaaatcattgaagagcgatcggccgaggccgttcctggaacggcaaaaacgaggt
tag
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integrated database retrieval system
