Roseibium algicola: B0E33_04540
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Entry
B0E33_04540 CDS
T04723
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
lagg
Roseibium algicola
Brite
KEGG Orthology (KO) [BR:
lagg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lagg03016
]
B0E33_04540
Enzymes [BR:
lagg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
B0E33_04540
Transfer RNA biogenesis [BR:
lagg03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
B0E33_04540
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AQQ02953
UniProt:
A0A0M6Y6N3
A0ABN4WMB1
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All DBs
Position
complement(959289..959909)
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AA seq
206 aa
AA seq
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MTIRYHKGDLPDLKAYETASAVAVDSETLGLNPHRDRLCVVQLSPGDGSADVVQIARGQS
EAPNLAALMTDTAKPKIFHFARFDVAVLQHYLNIQVSPIWCTKIASKLVRTYTDRHGLKD
ITRELLGVELSKQQQSSDWAAETLSDAQLAYAASDVLHLHALKERLEMMLEREERSHIAR
ACFDFLPTRAELDLKGWEENDIFAHS
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccgctatcacaaaggcgatttgcctgatctgaaagcctatgaaacggcaagt
gcggtggcggtcgattccgagaccctgggcctcaacccgcatcgtgaccggctctgtgtt
gtgcagctttcaccgggcgatggcagcgccgatgtggtccagatcgcacgcggccagagc
gaggcgccgaacctcgctgcgctaatgaccgatacggccaaaccgaaaatattccacttc
gcccggtttgatgttgcggtgcttcagcactatttgaacatccaggtctcgccgatctgg
tgtacgaaaatcgcctccaaactggttcggacctatacggatcgccacggactgaaggat
atcacgcgcgaacttctcggggtcgagttgtccaagcagcagcagagctcggattgggct
gcagaaaccttgagcgacgcccagctggcctacgcggcctcggacgtgcttcatctgcac
gccttgaaggaacggctggaaatgatgctggagcgtgaagaacgtagtcatattgcccgg
gcctgtttcgatttcctgccgacgcgggcagaactcgatctgaagggctgggaagaaaac
gatattttcgcccactcgtaa
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