Roseibium aggregatum: B0E33_04650
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Entry
B0E33_04650 CDS
T04723
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
lagg
Roseibium aggregatum
Pathway
lagg00630
Glyoxylate and dicarboxylate metabolism
lagg00680
Methane metabolism
lagg01100
Metabolic pathways
lagg01120
Microbial metabolism in diverse environments
lagg01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
lagg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
B0E33_04650
09102 Energy metabolism
00680 Methane metabolism
B0E33_04650
Enzymes [BR:
lagg01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
B0E33_04650
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GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
Fer4_7
Fer2
Fer4
Fer4_8
Fer4_10
Fer4_6
Fer4_9
Fer4_21
Fer4_16
Fer4_4
Fer4_17
Fer4_2
SymE_toxin
Fer4_15
Fer4_13
Motif
Other DBs
NCBI-ProteinID:
AQQ02973
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Position
complement(981869..984637)
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AA seq
922 aa
AA seq
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MSQVTFSLDGRMVTAEDGETIWQVAKREGVAIPHLCHKDAPGYRSDGNCRACMVDIEGER
VLAASCIRTPAEGMVVKTASERASKAREMVFELLAADQPSRDHHPDPESDFWKWSDHVGV
STSRFAPCAKPAQDISHPAIAVNLDACIACNLCERACREVQVNDVIGMADRGSHTVPVFD
LADPMGLSTCVACGECVSACPTGALMEKSLLDASASKREIFAEETVDSVCPFCGVGCLTS
VSVKDGKIVSVEGRDGPANENRLCVKGRFGFDYVSSRERLTKPLIRRDDAPKRGDIAMTL
ENHLDYFREATWDEALERAVGGLKAVYDAKGGRGIAGFGSAKGSNEEAYLFQKLIRQGFQ
TNNVDHCTRLCHASSVAALMEGIGSGAVTAPFNAAGDADCMIVIGARPEQNHPVAATYIK
QAAKNGTKLIVMDPRGQGLMRFADYGLKFKPGTDVAMLNAILNVIITEGLYDSQYIAAHV
DGFEALKEKIIDFTPEAMEPVCGIDAQTLREVARLYATSAKSIIFWGMGVSQHVHGTDNV
RCLIAMALTTGQIGRPGTGLHPLRGQNNVQGASDAGLIPMVFPDYRSVENPDIRAEFEDA
WGRTLDPARGLTVVEIMDDILDGGIEAMFVQGENPAMSDPDQAHARKALASLKHLVVQDI
FLTETAWHADVILPASAHAEKLGTFTNTNRQVQIGRPCVPMPGEARADWQILIDIANRLG
LNWTYDGVPAIYEEMRSHMNSLSNISWERLERDGTVTYPADAPDKPGNEILFGQSFPTAD
GRGRIVPTDLVPPDELPDDDFPLVLTTGRMLEHWHTGAMTRRAEVLNAIEPEPVVSMNPR
DIERSGLDIGQQVRVETRRGAITLTLRADRDVSTGMLFIPFCFSEAPANFLTNPQLDPFG
KIPEFKFCAARIGTVGQQQAAE
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgagccaggtcactttctccctcgacggtcggatggtcaccgcggaagacggcgaaacc
atctggcaagttgccaagcgcgaaggcgtcgccattccgcatctctgccacaaggacgca
ccgggttatcgctccgacggcaattgccgtgcctgtatggtcgatatcgagggcgagcgc
gtgcttgccgcttcctgtattcgcacccccgccgaaggcatggtggtgaagaccgccagc
gaacgtgcgtccaaggcacgcgagatggtgttcgaacttctggctgccgaccagccctcg
cgcgaccatcaccctgacccggaaagtgatttctggaaatggtccgaccatgtcggtgtc
tccaccagccgctttgccccatgcgccaaaccggcccaggacatttcccatccggccatc
gcagtcaatctggacgcctgcatcgcgtgcaatctgtgcgagcgagcctgccgggaagtg
caggtcaacgacgttatcggcatggcggatcgcggttcgcacacggtgccggtgttcgat
ctggcagacccgatgggtctttccacctgcgttgcctgcggcgaatgcgtgtcggcctgt
ccgaccggggccctgatggaaaagagccttctggatgccagcgccagcaagcgcgagatc
tttgccgaagaaaccgtcgacagcgtctgtcctttctgtggtgtgggctgcctgacgtct
gtctcggtgaaggacggcaagatcgtcagcgtcgagggccgcgacggcccggccaacgag
aaccggctctgcgtcaagggccgcttcggcttcgattatgtttccagccgcgagcgcctg
accaagccgctgatccgccgggacgatgcacccaagcgtggcgacattgccatgacgctg
gaaaaccatctcgactatttccgtgaggcaacctgggacgaagcgctcgagcgagccgtt
ggtggtcttaaagcggtttatgacgccaagggcggccgtggcatcgcgggcttcggctcg
gccaagggctccaacgaagaggcttatctcttccagaagctgatccgccagggtttccag
accaacaatgtcgaccactgcacgcgtctctgccacgcttcttctgtggctgcgctcatg
gagggcatcggttcgggtgcagtgacagccccgttcaatgcagccggcgatgcagactgc
atgatcgtgatcggcgctcgtccggaacagaaccacccggttgccgcgacctatatcaag
caggcggccaagaacggtacaaagctgatcgtcatggacccgcgcggccagggactgatg
cgctttgccgactacggcttgaagttcaagccgggaaccgatgtggcgatgttgaacgcg
atcctcaacgtcatcatcaccgaaggcctctacgacagccagtatatcgccgctcacgtg
gacggcttcgaggcactgaaggaaaagatcatcgatttcacgccggaagcgatggagccg
gtctgcggcatcgacgcacaaaccctgcgggaagtcgcaaggctttacgccaccagtgcc
aagtcgataatcttctggggtatgggcgtttcgcagcatgtccacggcaccgacaacgtc
cgctgcctgatcgccatggcgctgacaaccggccagataggccgcccgggcaccggcctg
catcctctacgcggtcagaacaacgtgcaaggggcatccgacgccgggctcattccgatg
gtgttcccggactatcgttcagttgaaaatccggatatccgcgccgaattcgaagacgcc
tggggccgcacgctcgaccccgcgcgcggtttgaccgtggtggagatcatggacgatatc
ctggatggtggcatcgaggcgatgttcgttcagggtgaaaacccggccatgtccgatccg
gaccaggcccatgcccgcaaggcactcgccagtctgaaacatcttgtggttcaggatatc
ttcctgacagaaaccgcctggcatgcggacgtgatcctgcctgcctccgcccatgcggaa
aagctcggcacgttcacgaacaccaaccgccaggttcagatcggccgtccttgcgtgccg
atgcccggtgaggcacgcgccgactggcagatcctcatcgatatcgccaaccgcctgggc
ctgaactggacctatgacggcgttccggcgatctatgaggaaatgcggtcgcacatgaac
tcgctgagtaacatttcctgggaaaggctggagcgcgacggcacggtcacctatccggcg
gatgccccggacaagcctggcaacgagatcctgttcggccagtccttcccgacggcagat
ggccgcgggcgcatcgtaccgacggatctggtgccgccggatgaacttcccgacgatgat
ttcccgttggtgctgaccacggggcgcatgctggagcattggcacaccggtgccatgacg
cggcgtgcggaagtgctcaatgccatcgaaccggagccagtcgtttccatgaacccgcgc
gatatcgagcgctcgggtctggacatcggccagcaggtgagggtggaaacacggcgcggc
gcaatcacattgaccctgcgcgcagaccgggacgtgtcgacaggcatgctcttcatcccg
ttctgcttcagcgaagccccggccaacttcctgaccaacccgcagctggacccctttggc
aagatcccggagttcaagttctgtgcagcgcggatcggaacggtcggacagcagcaggcg
gcagagtga
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