Roseibium aggregatum: B0E33_08865
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Entry
B0E33_08865 CDS
T04723
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lagg
Roseibium aggregatum
Brite
KEGG Orthology (KO) [BR:
lagg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lagg03400
]
B0E33_08865
Enzymes [BR:
lagg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B0E33_08865
DNA repair and recombination proteins [BR:
lagg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
B0E33_08865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AQQ03692
LinkDB
All DBs
Position
complement(1887162..1890308)
Genome browser
AA seq
1048 aa
AA seq
DB search
MARSARLWSVPPSVPFLKTLVDTLVDGTLIPGFRPLDDPLLLPSVTLYLPTRRAARLLPE
LFQQRFGGRPVLLPAIRPVGDADEDAQSLTANADLEPLPPAMPLLERHLAMTRLVKAWKG
MLRREALSLRSDEPLGLPASTADAAWLAADLLTLMDEVETEEADWTELSGLVPEDHARYW
QITLDFLQIVREAWPAHLAELKMMDPKARRSALIRREAERLERTPPRGPVIVAGVTGSVP
ATAELLKVVSRLESGVVVLPGLDRYLDSRSWAVLGEKTGKASTRKGVMQKDAATLPSHPQ
YSLKQLLDRLGAGREEVVTLGPDPDRGLLLREELVSEALRPADTSDGWTAYLDARPETDR
AEALDGVSIMTARNEADEALSVAIALREAIERQESAALISPDRMLTRRVAAELARWNIQV
DDSAGRPLDQTAPAILAILAAKLALGGCEPIDLLALLKHPLTRLGLPVKDIRSAARALER
GVVRGPRARPGTAGLQLAVEASREDADKAHTPRWKKIHDEDWDVIANLVDRLANALKPLE
ELAAEGGTILLTDLARRHVDVIEAISIDHEGSVAELYVGEAGEALAQFLTGLLEASSSGL
EIPAGEWPSVLPALMSGQAVRRRLPGDQRVQILGPMEARLQAFDFAILGGLNEGVWPQRT
RNDPWLNRPMKRDMGLEPPERRLGAAAHDFAQGMGARRVLLSRAARSDGAPTVASRWLQR
LTTLAGPDLTKKLEAQGAVYSALAAQLDRPEGAVRPASRPHPRPPLAARPKSLSITEIER
LIRDPYAIFARHVLELQPVDPIGGEPGAADKGNLIHDALADFLLTWTAAFDDSAVKALTE
IGEELFEPLDAFPAIRALWWPRFQKIAAGFVAYEARRSQHVSQRFLEIGGGVELKLPGFD
FRLRGRADRIDLLSGGGLSVVDYKTGQVPSQKQVDALLSPQLPLEAAMVRRFGFKDVPAD
APISELLYLQLKGGSEPVIEAPRNPKDTPLEDLVEDAWTRLEQLIAHYVREDIGYLSRAR
VMRERQMGGDYDHLARTQEWALGSEEPS
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcagcgcgcgcctctggtctgtcccgccgtccgtccctttcctgaaaacgctg
gtcgacacactggtcgacggcacgttgatccccggctttcgcccgctggacgatccactg
ctgctgccgtcggtcacgctgtatctgccgacgcgccgcgctgcgcgcctgctgccggag
cttttccagcagcggtttggtggccggccggttctcctgcctgccatccgcccggtgggc
gatgccgacgaggatgcgcagagcctgaccgccaatgcggatctggaacctctgccgccg
gcaatgccccttctggaacgtcatcttgcgatgacgcggctggtaaaggcctggaaaggc
atgctgcgccgggaagcgctcagtctcaggtccgacgaacctctcggccttccggcgtcg
acggccgatgcagcctggttggcggcagacctgctgacgcttatggacgaggttgagacg
gaagaagccgactggacggaactgtccggtctggtgccggaggaccatgcccggtactgg
cagatcacgctcgatttcctgcagatcgtacgggaggcctggcccgcgcatctggccgaa
ctgaaaatgatggacccgaaggcccgccgctcggcccttatccggcgcgaggccgagcgc
ctggaacggacacctcctcgtggcccggtcattgttgcgggtgtcaccggctcggttccg
gccaccgccgaattgctgaaggttgtctcccggcttgaatccggtgtcgtcgtgctgcct
gggctggaccgctatctggacagccgctcctgggccgtattgggagaaaagacgggcaag
gcctcgacccgcaagggtgtgatgcagaaagacgcggcaaccctgccttcacatccgcag
tattctctgaagcagttgcttgatcggctgggtgccgggcgggaagaggtcgtaacactc
gggccggacccggaccgtgggctcctgctgcgtgaggaacttgtctccgaagctttgcgt
cccgccgatacctccgatggctggacagcctatctggatgcccgtcccgaaacggacagg
gcggaggcattggatggtgtctcgatcatgactgcccgcaacgaggcggatgaagccttg
agcgtcgcgattgccttgcgcgaagcgatcgagcggcaggaaagtgcggccctcatttcg
ccggaccgtatgttgacgcgccgggttgcggcagagcttgcccgctggaacatccaggtg
gacgacagtgccggccgcccgctcgaccagaccgcaccggcgatcctggcaatcctggca
gcaaaactcgcccttggtggctgcgagcctatcgatcttctggcgctgctgaagcatccg
ctgacacggttgggcctgccggtgaaggacatccggtctgccgcccgcgcgctggagcgt
ggcgtggttcgcggaccgcgcgcccggccgggaacggcaggtttgcagctggctgtcgag
gcgagccgggaagatgcggacaaggcacatacgccacgctggaaaaagatccacgacgaa
gactgggacgtgatcgcgaaccttgtcgaccgtctggcgaacgcactgaaaccgctggaa
gaacttgccgcagaaggcggcacgatccttctgaccgacctcgcacggcgtcatgtcgat
gtgatcgaggcgatctcgatcgatcacgaaggttccgtggcagaactttacgtcggtgag
gcgggcgaggcgctggcccagttcctgaccggtcttctggaagcaagctccagcggactg
gaaattcccgccggcgaatggccgtccgtattgcctgcgctgatgtccggtcaggccgta
cggcgcaggttgccgggcgaccagcgggtgcagatcctcggccccatggaagcacggctt
caggcatttgatttcgcgatcctgggtggcctcaatgagggcgtctggcctcaacgcacg
cgcaatgatccgtggctgaaccggccgatgaagcgcgacatggggctggaacccccggag
cgccggctcggtgcggccgcacatgactttgcgcaaggcatgggtgcacggcgggtcctt
ctgtcgcgtgccgcacgctccgacggcgctcccactgtcgcatcgcgctggctgcagcgc
ctgaccacgcttgccgggcctgacctgacgaagaaactggaagcgcaaggggcggtatat
tccgcccttgcagcacagctcgaccggccggaaggcgcggtgcggcccgcgtcccggcct
caccctcgtccgcccttggcagcgcgcccgaaatcgctctccatcaccgaaatcgaacgc
ctgatccgcgatccctacgcgatctttgcccgtcacgtgctcgagctgcagccggtcgac
ccgatcggcggcgaacccggtgctgccgacaagggcaacctcattcacgatgcgctggca
gatttcctgctgacctggaccgccgcattcgacgacagtgccgtaaaggccctgacagag
atcggcgaggagctgtttgagcctcttgatgcgtttccggcgatccgggcgctttggtgg
ccgcgtttccagaaaattgcggctggcttcgttgcctacgaagcgaggcggtcgcaacac
gtcagtcagcggttcctggaaatcggcggcggtgttgaactgaagttgcccggcttcgat
ttccgcctgcgcggccgggcagaccggatcgaccttctgagtggcggcgggctgtccgtg
gtcgattacaagacagggcaggtgccctcgcaaaagcaggtcgacgcgctcctgtcgccg
caattgccgctggaggccgcgatggtccggcggttcgggttcaaggatgtgccggctgac
gcgcccatatccgagcttttgtatctgcagctgaagggcggcagcgaacctgtgatcgaa
gcgccgcgaaacccgaaggacacgccgctggaagatctggtggaagacgcctggacgcgg
ctggaacagttgatcgcacattatgtcagggaagacattggttacctgtcccgtgcccgc
gtcatgcgcgaacggcagatgggcggtgactatgatcatcttgccagaacgcaggaatgg
gcacttggatcggaggagccttcatga
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