Roseibium aggregatum: B0E33_09520
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Entry
B0E33_09520 CDS
T04723
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lagg
Roseibium aggregatum
Brite
KEGG Orthology (KO) [BR:
lagg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lagg03016
]
B0E33_09520
Enzymes [BR:
lagg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
B0E33_09520
Transfer RNA biogenesis [BR:
lagg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
B0E33_09520
Prokaryotic type
B0E33_09520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AQQ03802
LinkDB
All DBs
Position
complement(2033325..2034269)
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AA seq
314 aa
AA seq
DB search
MARQKQFKRKKNAINGWLVLDKPYGISSNEALGKIKRIFSPEKVGHAGTLDPRASGLLPV
AFGEATKTVPFVMDGRKVYRFEVTWGVETNTDDTEGEAVATSDVRPSADEISAVLGEFVG
TIMQVPPKFSAIKVAGERAYDLARDGEEVELEARPIDVHRLDLVECPDKNRAVFEAECGK
GTYVRAIARDLGRRLGSRGHVTELRRLLVGPFGEEDLIGLDEIQEASEALEEGAGIDALV
EEFVLPVREAMDNLIEVPVSLDDAAKIRKGMAVLLRGRDAPLNTEVAFASHASVPVAIGS
IDKGRFQPTRVFHL
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggcacgccaaaaacaattcaaaagaaaaaagaacgcaatcaacggatggctcgtgctg
gacaagccatatggcatctcctccaacgaggcgcttggcaagatcaagcgcatcttctcg
ccggaaaaggtcggccatgccggaacgcttgatccgcgcgcgtccggcctcctgccggtt
gccttcggcgaagccacgaaaaccgttcccttcgtcatggatggccgcaaggtctaccgt
ttcgaggtgacctggggcgtggaaaccaataccgacgacaccgaaggcgaggcggttgca
acgtccgacgtgcggccgagtgcggatgaaatctcggccgtccttggcgagtttgtcggc
acgatcatgcaggtcccgccgaaattctccgccatcaaggttgccggtgaacgggcgtat
gatctggcgcgtgacggtgaggaagtcgaactggaagcccgcccgatcgacgtgcaccgg
ctggatctggttgaatgtccggataagaaccgcgccgtcttcgaggctgaatgcggcaag
ggcacctatgtgcgggccatcgcacgcgatctcggccgccggctcggcagccgcggtcac
gtgaccgagttgcgccgtttgctggtcggtccgttcggcgaagaggacctgatcgggctg
gacgaaatccaggaagcatccgaggcgcttgaggaaggcgccggcattgatgctctagtc
gaggagttcgtcctgccggttcgcgaggcgatggacaatctgatcgaggtacccgtttcg
ctcgatgacgcggccaagatccgcaaaggcatggccgtgctgctgcgcggccgggatgct
ccgctcaacacggaagtcgcctttgccagccacgccagcgtgccggttgccatcggctca
attgacaagggccggttccagccgaccagggtgtttcacctgtaa
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