KEGG   Roseibium algicola: B0E33_11930
Entry
B0E33_11930       CDS       T04723                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
lagg  Roseibium algicola
Pathway
lagg03030  DNA replication
lagg03410  Base excision repair
lagg03420  Nucleotide excision repair
lagg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lagg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    B0E33_11930
   03410 Base excision repair
    B0E33_11930
   03420 Nucleotide excision repair
    B0E33_11930
   03440 Homologous recombination
    B0E33_11930
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lagg03032]
    B0E33_11930
   03400 DNA repair and recombination proteins [BR:lagg03400]
    B0E33_11930
Enzymes [BR:lagg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     B0E33_11930
DNA replication proteins [BR:lagg03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     B0E33_11930
DNA repair and recombination proteins [BR:lagg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     B0E33_11930
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     B0E33_11930
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DNA_polI_exo1 Taq-exonuc HHH_5
Other DBs
NCBI-ProteinID: AQQ04205
UniProt: A0ABM6I1J3
LinkDB
Position
complement(2556680..2559670)
AA seq 996 aa
MIRAMSTQSTSSALTADDHLILVDGSTFIFRAYHALPPLTRKPDGLPVGAVSGFCNMLWK
LLQEGLTPEEGDEPTHFAVIFDHSAQTFRNEIYPEYKAHRPDPPEDLVPQFGLIREATRA
FSVHCIEQEGFEADDLIATYAREAAEQGARVTIVSGDKDLMQLIGPKVGMIDTMKNKTFG
EAEVFEKFGVGPDKVIEVQSLAGDSVDNVPGVPGIGLKTAALLINEFGDLETLLAKADTI
KQNKRRENLIEFADQARISRQLVTLKQDVPVKVPVGELSVTDVDGPKALGFLKAMGFTTL
TRRVADVTGADLDTVDASDLKVPGWDVPDHKGRMMERAAGSDSAGSEAAKTPGDADPDNS
GLLVPQTVADARAQTIRAIPVDSSAYETVTSLDRLKEWCDAAFEKGYVAFDTETTSLDAM
QAELVGVSLSTEPGKACYVPLGHVDGEGDLLGGGGLVEGQIPLKDALEVLKPMLEDRSVL
KIAQNLKYDWLVMTRYGVDITPYDDTMLLSYTVDAGKGGNGMDELSERWLDHKPIPFKEI
CGSGKSMITFDKVAIDKATAYAAEDADVTLRLWLILKPRLASERMATAYETLERPMVPVL
ARMEKRGISVDRQMLSRLSGEFAQGMAGKEAEIYELAGESFNIGSPKQLGDILFGKMGLP
GGKKTKTGAWSTSAQVLEDLAAEGHELPSRIVSWRQLSKLKSTYTDALPGYINPETGRVH
TSYALAATTTGRLSSSEPNLQNIPVRTEEGRKIRKAFIAEKGHKLISADYSQIELRVLAH
MADIPQLKKAFDDGLDIHAMTASEMFGTPIEGMDPMVRRRAKAINFGIIYGISAFGLANQ
LGISRGEAGDYIKTYFERFPGIKDYMEATKKQVHANGYVTTIFGRKAHYPEVNTKNPNMR
AFYERAAINAPIQGSAADILRRAMVRMENRLEGSKLDAQMLLQVHDELIFEVPDAQVEST
IPVIRDVMENACDPALKLSVPLQVDARAADNWDEAH
NT seq 2991 nt   +upstreamnt  +downstreamnt
atgatccgcgccatgtcgacgcaaagcacctcctccgccctcaccgccgatgaccatctc
atcctggtcgacgggtccacgttcatttttcgcgcctatcacgcgctgccgccgctgacg
cgcaagccggacgggcttcctgtcggggcggtttctggcttctgcaacatgctgtggaag
ctgctgcaggaaggcctgacaccggaggaaggcgacgagcccacccatttcgcggtgatc
ttcgaccattccgcgcagacattccggaacgagatttatccggaatacaaggcccaccgg
ccggacccgccggaagatctggtgccgcagttcggccttatccgcgaagcgacacgcgcc
ttttcggttcactgcatcgagcaggaaggcttcgaggcggacgacctgatcgcgacctat
gcccgtgaggctgccgaacagggcgcgcgcgtcaccatcgtttcaggcgacaaggacctg
atgcagctgatcggcccgaaggtgggcatgatcgacaccatgaagaacaagaccttcggc
gaagccgaggtgttcgagaaattcggcgtcggtcccgacaaggtcatcgaggtgcaatcg
ctggcgggcgacagcgtcgataacgtgcccggcgtgccgggtatcggcctgaagaccgcg
gcccttttgatcaacgaatttggcgatctggaaacgctgctcgccaaggcagacacgatc
aaacagaacaagcgccgggaaaacctgatcgaatttgccgatcaggcgcgaatttccagg
cagctcgtcactctcaagcaggatgtgccggtcaaggtgccggtgggcgaattgtcggtt
accgatgttgacggacccaaggcgctcggcttcctgaaggcgatggggttcaccaccctc
acccggcgcgttgcggatgtgaccggtgccgatctggatacggtcgatgcatcggacctc
aaggttccgggatgggatgttccggaccacaagggccggatgatggagcgcgcagccggc
agtgacagcgcgggttcggaagctgcaaaaaccccgggcgacgctgatccggacaattcc
ggccttctggtaccgcagacggttgccgatgcacgcgcccagacgatccgggcgatcccg
gtcgacagcagcgcctatgaaaccgtcaccagcctcgaccgcttgaaggaatggtgcgac
gcggcctttgaaaagggctacgtcgccttcgataccgaaacgacatcgctggacgccatg
caggcagagcttgtcggtgtttcgctgtccaccgagcccggcaaggcctgttatgtgccg
cttggccacgtcgacggcgagggtgatcttcttggcggtggcggtcttgtcgaaggccag
atcccgctgaaagacgcgctggaagtgctgaagccgatgctggaggaccgttcggttctc
aagatcgcgcagaacctcaagtacgactggctggtgatgacccgatacggtgtcgacatc
acgccttacgacgacacaatgctgctgtcctacacggtcgatgccggcaagggcggcaac
ggcatggacgaactgtccgagcgctggctcgatcacaagccgatcccgttcaaggaaatc
tgtggctccggcaagtcgatgatcaccttcgacaaggtcgccatcgacaaggcaaccgcc
tatgcggcggaagacgccgatgtgacgcttcgtctctggctgatcctgaagccgaggctc
gcttccgagcgtatggcgaccgcctacgagacgctggaacggccgatggtgccggtgctt
gcgcgcatggaaaagcggggcatctccgtcgaccggcagatgctgtcgcgcctttcgggt
gaattcgcgcaaggcatggccggcaaggaagccgagatttacgagctggccggtgaaagc
ttcaacatcggttcgcccaagcagcttggtgatatcctgttcggcaagatgggtcttccc
ggcggcaagaagacaaagaccggcgcctggtcgacctcggcgcaggttctggaagatctg
gccgcggaagggcacgaactgccatcgcggatcgtctcctggcgccagctttccaagctg
aaatccacctacaccgacgccctgcccggttacatcaatccggaaacggggcgtgtgcac
acatcctacgcgctggcggcaaccaccaccgggcgtctgtcctcgtcggaaccgaacctg
cagaacattccggtccggaccgaggaaggccgcaagatccgcaaggccttcattgccgaa
aagggtcacaagctgatctcggccgactacagccagatcgagctgcgcgtcctggcgcat
atggccgatattcctcagttgaagaaggcgttcgacgacgggctggacattcacgccatg
acggcaagcgaaatgttcggaacgccgatcgaaggcatggatccgatggtccgtcgccgg
gcgaaggcgatcaacttcggcatcatctacggcatttccgcattcggcctcgcaaaccag
ctcggcatctcgcgcggcgaagcgggcgactatatcaagacctatttcgagcgtttcccg
ggcatcaaggactacatggaagcgaccaagaagcaggttcatgcgaacggctacgtgacc
acgatcttcggccgcaaggcgcattatccggaagtgaacaccaagaacccgaacatgcgc
gccttctatgaacgtgccgctatcaacgccccgatccaggggtctgccgcggatatcctg
cgtcgggcgatggtgcgcatggaaaaccggctggaaggctcaaagttggatgcgcagatg
ctgctgcaggtgcatgacgaactgatcttcgaagtgccggatgcgcaggtggaatccacc
attccggtgatcagggacgtaatggaaaacgcctgcgatccggcgctgaaactctccgtg
ccgcttcaggtcgacgcccgcgccgccgacaattgggacgaggcgcattag

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