Roseibium aggregatum: B0E33_12345
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Entry
B0E33_12345 CDS
T04723
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
lagg
Roseibium aggregatum
Brite
KEGG Orthology (KO) [BR:
lagg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lagg03016
]
B0E33_12345
Transfer RNA biogenesis [BR:
lagg03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
B0E33_12345
Prokaryotic type
Methyltransferases
B0E33_12345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
AAA_28
RsgA_GTPase
AIG1
ABC_tran
NTPase_P4
MCM
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AQQ04280
LinkDB
All DBs
Position
2642911..2644260
Genome browser
AA seq
449 aa
AA seq
DB search
MADTIFALSSGAVPSGVAVIRVSGPGTREIVETLAGKVPQPRKTMLAKLRDPETKDVLDE
ALVLYFEGPSSFTGEDVAEFQCHGGRAVVSSLLSVLSRFSNCRPAEAGEFTRRAFDRGRM
DLTEVEGLADLIAAETESQRKQAVRQMGGALGKLYDDWRKRLIHMRAMIEADFDFADEED
VPGSVADEVWAEATQLHYEIAEHLEKSRSGERLRSGLQVVLMGAPNAGKSSLLNAIAGRE
VAIVTEEAGTTRDVIEVHLDLSGYPVTLVDTAGLRKTEGVVEKEGIRRAEERGRGADLIL
WAVEPGGVEQDDVAAGLPEDLRRSVPVWTVRTKADLETLPEQDSSGTIQAIACSSKSAEG
MNPLFSRLTRFAEETISVGEAPLATRERHRHYLKDCLSGLRAAVDMVHLPAELRAEDLRR
AADALGRITGRFDVEDLLDVIFRDFCIGK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggctgacacgatctttgcgctctccagtggagctgtgccttcgggcgttgcggtgatc
cgtgtgtctggtccaggtaccagggagatcgttgagacactggctggcaaggtgccacag
ccgcggaagacgatgctggccaagctccgggatccggaaacgaaggacgttctcgacgag
gccctggtactctactttgaaggaccttccagcttcacgggagaggacgttgccgagttc
caatgccatggtggacgtgccgtggtctcaagcctcctgtccgtactttcccggttttcc
aattgccgtccggccgaggcaggggagttcacgcgccgcgctttcgatcgtggccgcatg
gacctcacggaagttgagggcctggcagatctcatcgccgcagagaccgagagccagcgc
aagcaggcagtccgtcagatgggtggagccctcggcaaactctatgacgactggagaaag
cgtctcatccatatgcgcgcaatgatcgaggccgacttcgatttcgccgatgaagaggat
gttcctggcagcgtggccgatgaagtctgggcggaagcaacccagctccattacgagatt
gcagagcaccttgagaaatcccgcagcggcgagcgtctacggtccggcttgcaggtggtg
ctgatgggggcacccaatgccggcaagtccagtctcctgaatgccatcgcaggacgggag
gtcgccatcgtcacggaagaagccggaacgacccgggacgtgatcgaggttcatctggat
ctttcagggtatcccgtgacgcttgtcgataccgccggcctccggaagacggagggtgtg
gttgagaaggaaggcatacgccgggcagaggaacggggccggggagcggatctcatcctg
tgggcggtggagcctggtggggtggaacaggacgatgtcgccgccggccttccggaagac
cttcgccgtagtgtgcctgtctggaccgttcgaacgaaggctgatcttgagactcttccg
gaacaagactcttccggaacgatccaggcaattgcttgttccagcaaaagcgctgaaggt
atgaacccgcttttttcccggcttacccgttttgccgaggaaacgatatctgtcggcgaa
gcaccactggccacccgggaacggcaccgtcactatctcaaggattgtctgtccggcctg
agagctgccgtggatatggtgcacctgccggcggaattgcgcgcggaagaccttcgccgg
gctgcggatgctctcgggcggatcaccgggaggttcgatgtcgaggatttgcttgatgtg
atcttccgggatttctgtatcggcaagtga
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