Roseibium algicola: B0E33_12670
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Entry
B0E33_12670 CDS
T04723
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
lagg
Roseibium algicola
Pathway
lagg00300
Lysine biosynthesis
lagg00470
D-Amino acid metabolism
lagg01100
Metabolic pathways
lagg01110
Biosynthesis of secondary metabolites
lagg01120
Microbial metabolism in diverse environments
lagg01230
Biosynthesis of amino acids
Module
lagg_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
lagg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
B0E33_12670
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
B0E33_12670
Enzymes [BR:
lagg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
B0E33_12670
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AQQ04338
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Position
2705358..2706632
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AA seq
424 aa
AA seq
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MHHFDYKNGELFAEDVAIETIAREVGTPFYCYSTATLTRHYQVFAAAFSDIPSLVCYAMK
ANSNQAVLKTLAQLGAGMDVVSEGELRRARAAGVPASKIVFSGVGKTEAEQAYALQEDIL
CFNVESEPELRQLSRVATAMGKTARVSMRINPDVDAKTHAKIATGKAENKFGIPWQRARD
VYAEAAALPGIKVTGIDMHIGSQITELEPFDNAFARLGELITDLRSQGHTIDHVDLGGGL
GIPYITDNNPPPHPDAYAQVVKKHVRELDCMVMFEPGRMIAGNAGILVTEVVYVKEGADK
NFVIVDAAMNDLIRPTLYEAYHEVRPVREPGKETDRIKADIVGPVCETGDFLAQNRDMPR
VEAGEMLAVYSAGAYGAVQSCTYNSRLLVPEVLVNADQFAVIRPRTSYEDLLGLDRIPDW
LKGS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
ttgcatcacttcgattacaagaatggcgagctgtttgccgaagacgtggcgatcgagacg
atcgcgcgtgaagtcggcacgccgttctactgctattccacggcaacgctcacccgtcac
taccaggtgtttgccgccgcattcagcgatatcccgtcgctggtctgctatgcgatgaag
gcaaattccaaccaggcggtcctgaagacgcttgcacagttgggcgccggcatggacgtt
gtgtcggaaggcgaattgcgccgtgcacgggcagcgggcgttcccgcgtcgaagatcgtc
ttttccggggtcggcaagaccgaggccgaacaagcctacgcgcttcaggaagatatcttg
tgtttcaacgtggagtccgagcccgagttgcgccaactttcacgggttgccactgcaatg
ggcaagaccgcacgggtgtccatgcgcatcaacccggacgtcgatgccaagacccatgcc
aagattgcgaccggcaaggccgagaacaagtttggtattccctggcagcgtgcacgtgac
gtttatgccgaggcagcggctctgcccggtatcaaggtcaccggcatcgacatgcacatc
ggatcgcagattacggagctggagcctttcgacaacgcatttgcgcggctgggcgagctg
atcacggatctgcgctcgcaaggccacacgatcgaccatgtcgatctcggtggcggactg
ggcatcccctatatcaccgataacaatccgccgccgcatccggacgcttatgcccaggtg
gtcaagaagcatgtgcgcgaactggactgcatggtcatgttcgagccgggccgcatgatt
gccggcaacgccggcatcctggtcaccgaagtcgtctatgtgaaggaaggcgccgacaag
aatttcgtcattgtcgatgccgccatgaacgacctgatccgtccgacgctttacgaggcc
tatcacgaggttcgcccggtacgcgaaccggggaaagaaacagaccgaatcaaggccgat
atcgtcggtccggtgtgcgaaaccggtgattttctggcccagaaccgggatatgcccagg
gtagaagccggggaaatgctggcggtctattcggccggcgcctatggcgcagtccagtcc
tgcacctacaattcgcggcttctggtgcccgaagtgctcgtaaatgcagaccaatttgcc
gttatccggccccggaccagctacgaagacctgctcggtctggaccggattccggactgg
ctcaagggttcgtga
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