Roseibium algicola: B0E33_16010
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Entry
B0E33_16010 CDS
T04723
Name
(GenBank) lytic transglycosylase
KO
K08305
peptidoglycan lytic transglycosylase B [EC:
4.2.2.29
]
Organism
lagg
Roseibium algicola
Brite
KEGG Orthology (KO) [BR:
lagg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lagg01011
]
B0E33_16010
Enzymes [BR:
lagg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
B0E33_16010
Peptidoglycan biosynthesis and degradation proteins [BR:
lagg01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
B0E33_16010
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Motif
Pfam:
SLT_2
PG_binding_1
FG-GAP_3
HTH_3
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
AQQ07453
UniProt:
A0ABM6IAE5
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Position
3437687..3438958
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AA seq
423 aa
AA seq
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MRNLAQLTANVKTILPFSGRLRTLGRRLLLTAAATGTLLAVSVPAQADQGFSQFVSGFWP
TAKAAGISSQTYNAVFTGMQPDDDTLRLMSKQSEFVKPIWDYLDSAVSDTRVEKGREMLK
EYSQVLAVIENRYGVDREAVLAIWGMETNYGGFMGRHNVIQALATLAYAAPRRKSFWEKE
LVTALAIVQAGHVRFQDMEGSWAGAMGHTQFMPSSWKAYAADYDGDGRRDIWTSIPDALA
STAAYLQKHGWQTGKTWGYEVALPSGFDYHMADGEKTLTLGEWGRYGIRRSNGKDFPRPS
DNAILVLPAGASGPAFLMLKNFYVIKRYNNATAYALAVGHLADRIIGGGPIEGDWSREHL
PLNRSETAELQALLNQRGFSVGTADGRIGPATRKGIRAYQRSRGMVPDGYASIVLLARLK
LDG
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcggaaccttgcgcagctgactgcgaacgtgaaaaccatattgcccttttcaggaaga
ctgagaaccctcgggcgccggctgcttttgactgccgcggcgacgggcactttgctggcc
gtttctgtgccggcacaggccgatcaggggttcagccagttcgtttccggcttctggccg
acggccaaggcagccggcatttcttcccagacctacaacgcggtcttcactggcatgcag
ccggacgatgacaccttgcgcctgatgagcaagcaatccgagttcgtgaaaccgatctgg
gattatctcgatagcgccgtttcagacacgcgggtcgaaaaaggccgcgagatgctgaag
gagtacagccaggttcttgcggtcatcgaaaaccgctacggcgtcgatcgtgaagccgtc
ctggcgatctggggcatggaaaccaactatggcggcttcatggggcgtcataacgtgatc
caggcactggcgacgctggcctatgcggcgccgcgccggaagagcttctgggaaaaggaa
cttgttaccgcgctggcgatcgtccaggcaggtcatgtgcgttttcaggacatggaaggt
tcctgggccggcgccatggggcacacccagttcatgccctctagctggaaggcctatgcc
gccgactatgacggtgacggccgccgggatatctggacgtccatacccgatgcactcgcc
tcaaccgctgcctatctgcaaaagcacggctggcagacaggcaagacctggggatacgag
gtagccctgcccagcgggttcgactatcacatggccgacggcgaaaagacgctgacgcta
ggcgaatgggggcgatacggaattcgccggtcaaacggcaaggattttccgcggccgtcc
gacaacgccatcctggttctgcctgccggagcaagcggaccggcgttcctgatgctgaag
aacttctacgtgatcaagcgttacaacaacgcgactgcttatgcgcttgccgtcggccat
cttgccgaccggatcattggcggcggaccgatcgagggcgactggtcgcgcgagcacctt
ccgctcaatcgctctgaaaccgcggaattgcaggcgcttttgaaccagcgtggattttct
gtcggtacggcggacggcaggatcggacctgctacccgaaagggtatccgagcctaccag
cgctcacgtgggatggttcccgacggttatgcatccattgttttgctggcacgcctgaag
ctggacggctaa
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