Roseibium algicola: B0E33_16410
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Entry
B0E33_16410 CDS
T04723
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
lagg
Roseibium algicola
Pathway
lagg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lagg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B0E33_16410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lagg03400
]
B0E33_16410
Enzymes [BR:
lagg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B0E33_16410
DNA repair and recombination proteins [BR:
lagg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B0E33_16410
RecFOR pathway proteins
B0E33_16410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_3
AAA_16
AAA_22
AAA_14
nSTAND3
AAA_2
Rad17
AAA_18
RNA_helicase
AAA_28
AAA_17
AAA_33
TsaE
NTPase_1
AAA_24
NB-ARC
MCM
ABC_tran
Bac_DnaA
DUF815
Sigma54_activ_2
IstB_IS21
AAA_7
NACHT
Cytidylate_kin
Motif
Other DBs
NCBI-ProteinID:
AQQ04946
UniProt:
A0A0M6YDP2
LinkDB
All DBs
Position
3515705..3516745
Genome browser
AA seq
346 aa
AA seq
DB search
MSDDTRIVTPEIRGDEIDSTMRPQVLDDFVGQAQARANLKVFIGAAKARGEALDHVLFVG
PPGLGKTTLAQIMARELGVNFRATSGPVIAKAGDLAALLTNLEERDVLFIDEIHRLNPAV
EEVLYPAMEDFQLDLIIGEGPAARSVKIDLAKFTLVAATTRLGLLTTPLRDRFGIPVRLQ
FYTVPELEHIVKRGAAILGIGMVEDGAREIAKRSRGTPRIAGRLLRRVRDFAIVAGVERV
DRELADRALLQLEVDGAGLDSLDRRYLSQIAVNFGGGPVGIETIAAALSEPRDAIEEIVE
PYLIQNGFLQRTPRGRILTPMAFEHLGLAAPSRPDAPQMGLFTDPE
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatgacactcgcatcgtgacgccggaaatccggggggacgagatcgattcaacc
atgcgcccccaggtgctggatgattttgtcggtcaggcccaggcgcgcgccaatctgaag
gtctttatcggtgcggcgaaggctcggggtgaggcgctggaccatgtgttgttcgtcggg
cctcccggtctcggcaagacgacgctggcgcagatcatggcacgcgaactgggggtcaat
ttccgggcgacttccggtcctgtcattgccaaggccggcgacctggccgcacttctgacc
aacctggaagagcgcgacgtcctcttcatcgacgagatccatcggctcaatccggcagtc
gaggaggtgctttatccggcgatggaagatttccagctcgacctgatcatcggtgaagga
ccggctgcgcgatcagtcaagatcgacctggcgaagttcacgctcgttgccgcaacgacg
cggctgggcctcttgaccactccgctgcgcgatcgcttcggcattcctgtcaggctgcag
ttctatacggttccggagctggagcacatcgtcaagcgtggcgccgccattctcggcatc
ggcatggttgaagacggtgcccgcgagattgccaaacgctcccgcgggacaccgcgtatc
gccgggcgactgctgcggcgggtaagggactttgccattgtcgccggcgtcgagcgggtc
gacagggaactcgccgacagggcgcttctgcagctggaagtcgatggtgccgggctcgac
agtctcgaccgtcgttatctgagccagatcgcggtgaatttcggtggtgggccggtcggg
atcgagaccattgcggcggcgctttccgagcctcgtgacgccatcgaggagatcgtcgaa
ccctacctgatccagaacgggtttctgcagcggacgccaaggggacgtatcctgacgccg
atggcgttcgaacacctgggtcttgcggccccatccagaccggatgctccgcaaatggga
ctgttcaccgatcccgaatag
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