Roseibium aggregatum: B0E33_19150
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Entry
B0E33_19150 CDS
T04723
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
lagg
Roseibium aggregatum
Pathway
lagg02020
Two-component system
lagg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lagg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
B0E33_19150
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
B0E33_19150
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
lagg02022
]
B0E33_19150
02035 Bacterial motility proteins [BR:
lagg02035
]
B0E33_19150
Two-component system [BR:
lagg02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
B0E33_19150
Bacterial motility proteins [BR:
lagg02035
]
Flagellar system
Flagellar assembly proteins
Others
B0E33_19150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
Response_reg
AAA_16
AAA_19
AAA_3
MCM
AAA
HTH_50
AAA_2
AAA_7
TadZ_N
nSTAND3
TIP49
DUF3292
MerR
HTH_30
AAA_18
HTH_Tnp_ISL3
AAA_PrkA
Motif
Other DBs
NCBI-ProteinID:
AQQ05427
LinkDB
All DBs
Position
4144466..4145818
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AA seq
450 aa
AA seq
DB search
MRLLIVGTLGGQLTTASKIAMQGGAQVTHADDIEGALRVLRSGRGADLLMVEVHLDIAGL
IQKLQNERVHVPVVACGVETDAQAAVSAIRAGAKEYIPLPPDPELIAAVLAAVAQERGDL
IYRDDAMASVVKLAEQVAPSDASVLITGESGTGKEVIARHVHKCSNRASKPFISINCAAI
PEHLLESELFGHEKGAFTGAVARRIGKFEEADGGTLLLDEISEMDVRLQAKLLRAIQERV
IDRVGGTRPVPVNIRILATSNRDLAESVRQGHFREDLLFRLNVVNLKLPALRERPADIME
LALFFIKHYSEANGVPVRPLSVEARQALMSNPWPGNVRELENTMHRAVLLASGGEIGVEA
IRMPDGSPLSVSKGAAERAAQTAEAVTRSFVGRTVADVERDLILDTLDHCLGNRTHAAKI
LGISIRTLRNKLNQYTDEGISVPGPGEARA
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgttaattgtcggaacgctcggcggtcagctgacgacggcttccaagatcgcg
atgcagggcggggcccaggtcacccatgcggacgatatcgaaggtgccttgagggtgctt
cggtccgggcgcggagcggacctcctgatggtcgaggtccatctcgacattgccgggctg
atccagaaactccagaacgaacgcgtgcatgtgccggtggtggcctgcggcgtggaaacg
gatgcacaggccgcggtgtctgccattcgggcaggcgcgaaggaatatatcccgctgccg
cccgatccggagctgatcgcagccgttctggcggctgttgcccaggaacgcggcgatctg
atctaccgggacgatgccatggcatcggtggtcaagcttgccgaacaggtcgcgccatcc
gatgcttctgtgctgatcaccggtgaatccggcacgggtaaggaagtcattgcccgccat
gtgcacaaatgctcgaaccgggcctcgaagccgtttatctcgatcaactgcgcggccatt
cccgaacatcttctggaatccgaactcttcggccacgagaagggcgccttcaccggcgcg
gtcgcccgtcggatcggcaagttcgaggaagccgatggcggcacgctgctgcttgatgaa
atttcggaaatggacgttcgcctgcaggccaagctcctgcgcgccatccaggagcgtgtg
atcgaccgcgtcggcggcacgcgcccggttcctgtcaatatccgcatcctggcaacgtcc
aaccgggatcttgccgaaagcgtgcgtcagggccatttccgcgaagatcttctgttccgc
ctcaatgtggtgaacctgaagctgccggctcttcgcgagcggccggcggacatcatggaa
ctcgccctgttcttcatcaagcactactcggaagccaatggtgtgccggttcggccactg
tccgtcgaggcccgtcaggcgctgatgtccaatccgtggccgggtaacgtgcgcgaactg
gaaaacaccatgcaccgcgcggtgctgctggcttcgggtggtgaaatcggcgtcgaggcg
atccgcatgccggacggctcgccgctgagcgtctccaagggcgctgcggagcgtgcggcg
cagacggcggaagccgtgacgcgatccttcgtcggacgcacggttgccgatgtcgagcgt
gatctcattctcgacacgctggatcattgcctgggcaaccggacacatgctgcaaaaatt
ctgggtatttcaatccggacgctgcgcaacaagctgaatcaatataccgatgaaggaata
agcgttccgggaccgggcgaagcccgggcctga
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