Roseibium algicola: B0E33_25105
Help
Entry
B0E33_25105 CDS
T04723
Name
(GenBank) peptidase S11
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
lagg
Roseibium algicola
Pathway
lagg00550
Peptidoglycan biosynthesis
lagg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lagg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
B0E33_25105
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lagg01002
]
B0E33_25105
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lagg01011
]
B0E33_25105
Enzymes [BR:
lagg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
B0E33_25105
Peptidases and inhibitors [BR:
lagg01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
B0E33_25105
Peptidoglycan biosynthesis and degradation proteins [BR:
lagg01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
B0E33_25105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
SPOR
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
AQQ06454
UniProt:
A0A0M6Y010
A0ABM6I7M8
LinkDB
All DBs
Position
complement(5375887..5377572)
Genome browser
AA seq
561 aa
AA seq
DB search
MRIFRKGRALARTAKILTLGLVLLGVPATAMANPKYAGIVVDAKTGKTLYSSSADAYRYP
ASLTKIMTLYLVFEELEAGRLSLDSNLSVSSYASARPPSKLGLKPGGTIKVKDAILALVT
KSANDVASVIAENLGGSEKKFAERMTRTARQIGMSKTTFRNPHGLPDSGQRTTARDMATL
GRAIQERFPQYYGYFKTRAYKYNGRTYGNHNKLLGRVKGVDGIKTGYIRASGFNLVTSVN
RDGRQIVAVVMGGKTGASRNAQMTKLINSYLPKASRGPKTAPLIVQNTSEPTFVAIALKN
PPLPNSKPGSEPVPATGEPMVLAFTAPSNPGAIPTPAPAPLPVTASNAPVMASAQAPAPV
PGFGNDVPLPPKLVKQRFDSTFAVATALPPIPPSSPDEPLNTNSISRTALIEAARAEVVK
SDNSQRAVGSAQSVKTVSVQTIAVNTTPVETVAAPETAAADNSSDDDSVTVATSDTRDVE
PGWQVQIAATESEGQAITMLKNAKAKTGSALRGRVPYTEPVDTNGQTLYRARFVGFDTKT
AAWNACKSLKKAKYACFAIYQ
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatttttcgcaaaggacgggctctcgcccgcaccgctaagatcttgaccctcggc
ctggtgctcctgggggtcccggcaacggcgatggccaacccgaaatatgcggggatcgtc
gttgatgcaaaaaccggcaagacactttactcctcttcggctgacgcctaccggtacccg
gcatcgctcaccaagattatgacgctttatcttgtgttcgaggaactggaagccgggcga
ctgtcactggactccaacctgagcgtttccagctacgcttcagcacgtccgccctccaag
ctgggcctcaagcccggcggcacgatcaaagtcaaggacgccatcctcgcacttgttacc
aagtctgcgaacgacgtcgcatccgtgatcgctgaaaacctgggtggctctgaaaagaaa
ttcgccgagcgcatgacccgtacggcgcgccagatcggcatgtcgaagaccactttccgc
aacccgcacggcctgcccgacagcgggcagcgtacgacggcccgcgacatggcgacgctt
gggcgcgcaattcaggaacggttcccgcagtactacggctacttcaaaacccgtgcctac
aagtacaacggacgcacctatggcaaccacaacaagctgctgggccgcgtaaagggtgta
gacggcatcaagaccggttacatccgggcttccggcttcaacctggtgacttctgtgaac
cgggacgggcggcagattgtggccgtcgtgatgggtggcaagaccggcgcgtcacgcaac
gcgcagatgacaaagctcatcaactcctatctgcccaaggcaagccgcggcccgaaaacg
gccccgctgatcgttcagaacacgtctgaaccgactttcgtggcaattgcgctgaagaac
ccgcctcttccgaacagcaagccgggaagcgagcccgtgcctgcaacgggtgagccgatg
gtgctggcattcaccgcaccgtccaaccctggcgccattccaacaccggctccggccccc
cttcccgtgactgcgtccaatgcgccagtcatggcttcggcccaggcccctgctccggtt
ccaggctttggcaacgacgttccgctgccgccgaaactggtcaagcaacgctttgacagc
acgtttgcggtcgcaacagctttgccgccgatcccgccttcaagcccggatgagccgctg
aacaccaattcgatttcccggactgccctgatcgaagctgcaagagcagaagtcgtgaag
tcggacaacagccagcgcgctgtcggctccgcgcagtcggtcaagaccgtctccgttcag
acgatcgcggtcaacacgacgccggttgaaacagttgcagcgcctgaaaccgcagctgcc
gacaacagcagcgacgacgacagcgttacggttgcaaccagcgacacccgcgatgtcgag
ccgggctggcaggtccagatcgccgcaacagaatccgaaggccaggccatcactatgttg
aagaacgccaaggccaagaccggatccgcccttcgtggccgggtcccttacaccgaaccc
gtcgacaccaacggacagaccctctaccgggcccgcttcgtcggcttcgacaccaaaaca
gctgcgtggaatgcctgcaaaagcttgaaaaaggcaaaatacgcttgcttcgccatctac
cagtaa
DBGET
integrated database retrieval system
