Roseibium algicola: B0E33_25595
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Entry
B0E33_25595 CDS
T04723
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lagg
Roseibium algicola
Pathway
lagg03030
DNA replication
lagg03430
Mismatch repair
lagg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lagg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B0E33_25595
03430 Mismatch repair
B0E33_25595
03440 Homologous recombination
B0E33_25595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lagg03032
]
B0E33_25595
03400 DNA repair and recombination proteins [BR:
lagg03400
]
B0E33_25595
Enzymes [BR:
lagg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B0E33_25595
DNA replication proteins [BR:
lagg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B0E33_25595
DNA repair and recombination proteins [BR:
lagg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B0E33_25595
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
T2SSK
HROB
McdB_C
CDC24_OB3
Motif
Other DBs
NCBI-ProteinID:
AQQ07679
UniProt:
A0ABM6IAX8
LinkDB
All DBs
Position
5498062..5501538
Genome browser
AA seq
1158 aa
AA seq
DB search
MSSGSSENAGSEASGPGYVHLRVHSALSLLEGALPIKKLLDLAKADDQPALAIADTNNLF
GAQEFATKAWGSGIQPIAACQLSVFFDDGLESGRRGEPALSDVVLLAMTEAGYGNLMELS
SRAFLDTETGLRPHVSSGYLLSKSEGVIILTGGVGGPIGAALLAGRKDLAKSRLETLADR
FPGRCYVEIQRHGMEAERKTEDAFLDLAYEYGLPLVATNEAFFPKREDYEAHDALICISE
GRVLIEDDRRRLTPEHYFKSRAEMCALFADLPEALVSTVEIARRCSFRPLKRAPILPRFA
GADADPEEAEKAEAEELIRQAREGLQARLDAHGLAPGLEEKDYWDRLDYETGIIERMKFP
GYFLIVADFIKWAKGQDIPVGPGRGSGAGSLVAWSLTITDLDPMRFSLLFERFLNPERVS
MPDFDIDFCQTRREEVIRYVQEKYGRQQVAQIITFGSLQARAVLRDVGRVLQMPYGQVDR
LCKLVPANPANPVTLGQAIEEEPRLREAAKEEEIVERLLGMAQKLEGLYRHASTHAAGVV
IGDRPLEQLVPLYRDPRSDMPVAQFNMKMVEDAGLVKFDFLGLKTLTVIDTAVKLIERRG
IDVDVAALPIDDEKTYKLLARGETFGVFQLESQGMRRAIAGMKPDRFEDIIALVALYRPG
PMENIPVYNAVKHGEQDPDCLHPLLEPILMETNGIIVYQEQVMQIAQVLSGYSLGEADLL
RRAMGKKIAAEMEVQRARFVDGAVERGINKSHAGTIFDLVAKFANYGFNKSHAAAYALVS
YHTAWLKANHPVEFMAASMTLDLGNTEKLGDYRQECRRMKIEIEPPSINRGQVYFDVADG
KILYAMGAIKGVGEQAVEHIVEVRGDKPFKSLGDFARRISPKALNKRTLENLVAAGAFDE
LEPNRARVFEGLDRIMGLAQRTEENKTLGQDELFGGSDSEEPLQLDDVHGWTNEEKLQRE
HSAIGFYLSAHPIDEYASVLEKMRAQPWSQFSEAVKKGASHGRLAGTVVSMQERKTKTGN
RMGIVRLSDATGQYEALLFREKLEQFRDALQAGRSVVVLVGADMRDDEPSLRIEQVDPID
QVAARLQKSMRVFVRDERPIPSLAKQLQVRGEGDVTVIVLLENGAREVEVKLPGRFRLSP
EIAGALKAVPGVTDVQVA
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
ctgtcttccggttcgtcagaaaatgccggcagtgaggcaagcggtcccggctatgttcac
ctccgggtccattcggcgttgtcgcttctggaaggtgcgttgccgatcaagaagcttctc
gacctcgccaaggccgatgaccagccggcgctggcgattgccgataccaacaatctgttt
ggcgcacaggaatttgcgaccaaagcgtggggatccggaattcagccgattgccgcgtgt
cagctttccgtctttttcgacgatggtctggaaagcgggcggagaggggaacctgcgctt
tcggacgttgttcttctcgccatgacagaagccggttacggcaatctgatggagctgagt
tctcgggccttcctcgacacggagaccggtctgaggccacacgtttcctccgggtatctt
ctatcaaagtccgaaggcgttatcattctgaccggtggtgtcggagggccgatcggggct
gcgctccttgccggacgcaaggacctcgcaaaaagccggttggaaacactggcggaccgt
tttcctggccgttgctacgtggaaatccagcgccatggcatggaagccgagcgcaagacc
gaagacgcgtttctcgatctggcctacgaatacgggctgccactggtcgccaccaacgaa
gccttctttcccaagcgcgaagactatgaagctcatgacgccctgatctgcatttctgaa
ggccgggtgctgatagaggatgaccgcagacgcctgacacccgagcactacttcaaaagc
cgcgcggaaatgtgcgcgctctttgcggatttgccagaggcgcttgtttcaacggtagaa
attgcccggcgctgcagcttccgcccgttgaagcgcgcgccgatcctgccccggtttgcc
ggtgcggatgcggatccggaagaagcggagaaggcagaagcggaagagttgatccgccag
gcgcgcgaaggattgcaggcgcgccttgatgcgcacggactggctccgggtcttgaggag
aaggactactgggaccggctcgactacgagaccggcatcatcgagcgcatgaagtttccc
gggtacttcctgatcgttgccgacttcatcaaatgggcgaaagggcaggatattccggtc
ggcccgggtcgcgggtccggtgcggggtcactggtagcctggtccctgaccattaccgac
ctcgatcccatgcggttttcgctgctgttcgaacgcttcctcaatcctgaacgcgtttcg
atgcctgacttcgatatcgacttctgccagacccggcgtgaagaagtgatccgttatgtt
caggaaaaatacggccggcagcaggtcgcgcagatcatcaccttcggatcgcttcaggcc
cgcgccgtgctgcgcgatgtcggccgcgtgctgcaaatgccttatggccaggtcgaccgg
ctctgcaaacttgttcccgccaacccggcaaatcctgtaacgcttggtcaggcgatcgag
gaagagccacgcctgcgcgaggcagccaaggaagaggaaatcgtcgagcggctgctgggc
atggctcagaagctcgaaggcctttaccggcacgcttccacgcacgcggcgggcgttgtc
atcggtgacagacccctggaacagctggtgccgctctatcgagacccgcgttccgacatg
ccggtcgcccagttcaacatgaagatggtggaagatgccggacttgttaagttcgacttc
ctcggcctgaagacactgacggttatcgatacggcggtgaagctgattgaacggcgcggt
atcgatgtcgacgtcgcagccctgccgatcgacgacgagaaaacctacaagctgctggcg
cgcggcgaaacgtttggcgtgttccagctggaaagtcagggcatgcgccgcgcgattgca
ggcatgaaacccgaccggttcgaagacatcattgcccttgtggctttgtatcgccccgga
ccgatggaaaacatcccggtctacaacgcggtgaagcacggcgaacaggacccggactgc
ctgcatcccctgcttgaacccatcctgatggagacgaacggcattatcgtctaccaggaa
caggtgatgcagattgcgcaggttctgtccggctactctctcggtgaagcagaccttctg
cgccgcgccatgggtaagaagattgccgcggagatggaagtccagcgggcgcgttttgtc
gacggcgcggtggagcgtgggatcaacaagagccacgccggaacaatcttcgatcttgtg
gcgaagttcgccaactacggcttcaacaagtcgcacgctgcagcgtatgcgctggtctcc
tatcatacggcctggctcaaggcgaaccacccggtcgagttcatggccgcttccatgaca
ctggatctgggcaatacggaaaaactgggcgactaccgtcaggaatgtcggcgcatgaag
atcgagatcgagccgccgtcaatcaaccgcgggcaagtctattttgacgttgccgacggc
aagatcctttacgcgatgggcgcgatcaagggtgttggcgagcaggcggttgaacacatt
gttgaggttcggggcgacaagcctttcaagagccttggcgattttgcgcgtcggatttca
cccaaggccctcaacaagcgaacgcttgaaaacctggtcgcagccggagcattcgatgag
cttgagcccaaccgggcacgggtttttgaaggcctcgaccggatcatgggcctggctcaa
cgcaccgaggaaaacaagacgctcggccaggacgagctttttggcggcagcgacagcgaa
gaacccttgcagctggatgatgtccatggctggacaaacgaagagaagctgcagcgggaa
cactcggcgatcgggttttacctgtcagcgcatccgatcgacgaatacgcctccgtgctg
gaaaagatgcgggcacagccgtggagccagttttcggaagcagtcaagaagggggcgtct
cacggccggcttgccggcaccgtcgtgtccatgcaggaacgcaagaccaagaccggcaat
cgcatgggtatcgttcgcttgtccgatgctacgggccagtatgaggcgttgctcttccgt
gagaaactcgaacagttccgggatgccttgcaggctggacgttccgttgtcgtgctcgtc
ggggccgacatgcgcgacgacgagccctcccttcgaatcgaacaggttgatccgatcgat
caggttgcagcccgtctgcagaaaagcatgcgtgtctttgttcgcgatgaacgtccaatc
ccgagccttgcaaagcagttgcaggtgaggggtgaaggtgacgtgacggtgattgtgctt
ctggaaaacggcgcacgggaagtggaagtcaagctccccggccggttccgcctgtcaccg
gaaattgcgggcgcgctcaaggcagtgccaggtgtaacggacgtacaggtggcgtga
DBGET
integrated database retrieval system
