KEGG   Roseibium algicola: B0E33_26905
Entry
B0E33_26905       CDS       T04723                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
lagg  Roseibium algicola
Pathway
lagg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lagg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    B0E33_26905
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lagg03400]
    B0E33_26905
DNA repair and recombination proteins [BR:lagg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     B0E33_26905
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      B0E33_26905
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_29 DnaJ_CXXCXGXG AAA_21 RsgA_GTPase nSTAND1 AAA_33 BCA_ABC_TP_C CA109-like
Other DBs
NCBI-ProteinID: AQQ06759
UniProt: A0ABM6I8F9
LinkDB
Position
5791793..5794723
AA seq 976 aa
MKTAKGSQSEEAWKADPTRVISIRGAREHNLKGVDLDLPRDKLIVMTGLSGSGKSSLAFD
TIYAEGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSRNPRSTVGTVTE
IYDYMRLLFARVGVPYSPATGLPIESQTVSQMVDRILELEEGARLYLLAPMVRGRKGEYR
KELAELMKKGFQRVKIDGTFHEISEAPALDKKFKHDIDVVVDRIVVRDDISGRLADSLET
ALKLADGIAIAEFADKTDENGNPERMIFSEKFACPVSGFTIPEIEPRLFSFNNPFGACPT
CDGLGTTLAFEEDLVVPDHSLSLREGAVLPWAKTGSTSPYYAQTLEALCSHFKVSMATPW
KDLPSEVREAILHGTGNAKIEFVYDDGVRSYRTEKTFEGVIGNIERRWRETESTWVREEL
ARFQSDHACPACSGFRLKPEALAVKIAGRHIGQITEHSIRDASLWFEALPEQLNDKQSEI
AGRILKEIRERLKFLNDVGLEYLTLSRSSGTLSGGESQRIRLASQIGSGLTGVLYVLDEP
SIGLHQRDNARLLETLKHLRDLGNTVIVVEHDEDAVLTADYVVDVGPGAGVHGGQIVAKG
TPSEIMANPNSLTGQYLSGSMMVSRNDERRKINKKRKISVRGARGNNLKDIDVDVPLSTF
TCVTGVSGGGKSTFLIDTLYKAAARRLNGARDNPAPHDRIEGLEVLDKVIDIDQSPIGRT
PRSNPATYTGAFTPIREWFAGMPEAKARGYQPGRFSFNVKGGRCEACQGDGVIKIEMHFL
PDVYVTCDVCKGKRYNRETLEVEFKGKSIADVLDMTVDEAAVFFSAVPAVRDKMETLARV
GLGYIKVGQQATTLSGGEAQRVKLAKELSKRSTGRTLYILDEPTTGLHFHDVAKLLEVLH
ELVDQGNTVLVIEHNLEVIKTADWIIDLGPEGGDGGGTVVATGRPEDVAEVSESYTGQFL
QELLQRRPQRAHDAAE
NT seq 2931 nt   +upstreamnt  +downstreamnt
atgaagacagccaagggatcgcagtcggaagaagcctggaaggcggacccaacacgggtc
atcagcatccgtggcgcacgggagcataacctcaagggcgtcgacctggacctgccccgc
gacaagttgattgtcatgaccggcctgtccggctcaggcaagtcgtccctcgccttcgac
accatatatgcagaaggtcagcggcggtacgtggaaagcctgtccgcctacgcgcgtcag
ttcctggaaatgatgcagaaaccggacgtcgaccagatcgacggactgtcgccggcaatc
tccatcgaacagaagaccacgtcccgcaatccgcgctccacggtcggaacggttacggaa
atctacgattacatgcgccttttgtttgcgcgtgtcggcgttccctattcccccgccacc
ggtctgccgatcgaaagccagaccgtcagccagatggtcgatcgcattctggagctggaa
gaaggtgcccgcctctacctgcttgcgccgatggttcgcggccgcaagggcgagtatcgc
aaggaacttgccgagctgatgaagaagggtttccagcgcgtcaagatcgacggaaccttc
catgagatttccgaggcccctgccctcgacaagaaattcaagcacgatatcgacgtcgtc
gtggaccgtatcgtcgtgcgtgacgatatctccggtcggcttgccgattcactggaaacg
gcgctgaaacttgccgatggcattgcaattgccgaatttgccgacaagaccgacgagaac
ggcaacccggaacggatgatcttttccgaaaaatttgcctgcccggtatccggcttcacc
attccggagatcgagccgcgtttgttctcgttcaacaatcccttcggtgcctgccccact
tgtgatggccttggaacgacactcgcctttgaagaagacctggttgttcctgaccactcg
ctttccctgcgcgaaggagctgtcctgccgtgggcgaagacagggtcgacatcaccttat
tatgcccagacgctggaagcactctgcagtcatttcaaggtgtccatggcaacgccctgg
aaggatcttccttcggaagtgcgcgaggcaatccttcatggaaccggcaatgcgaagatt
gaattcgtctatgatgacggcgtccgcagctaccggacagaaaagacctttgaaggtgta
atcggcaatatcgagcggcgctggcgcgagacagaatccacctgggttcgcgaggaactg
gcaaggtttcaatccgatcatgcctgcccggcttgcagcgggttccgtctgaagccggaa
gcgcttgccgtcaagatcgccggcaggcatatcggtcagatcaccgaacattccattcgc
gatgcaagcctctggtttgaagccctgccggagcaactgaacgacaaacagagcgaaatc
gcaggccgcatcctgaaggaaattcgcgagcggctgaagttcctgaatgacgttggcctt
gaatatctcaccttgtcccgctcttccggaacactgtcaggtggcgaaagccagcgtatc
cgcctcgcctcgcagatcggctcggggctgacaggagttctctatgtactggatgagccg
tccatcggccttcatcagcgcgacaacgcccgtcttctggaaacgctgaaacacctgcgc
gatctcggcaatacggtgattgtggtcgagcatgatgaagacgcggtgctgactgccgat
tacgttgtcgacgtcggaccaggagcgggtgtccatggtgggcagatcgtcgccaagggc
actccctccgaaatcatggccaatcccaattcgttgacggggcagtacctgtctggatcc
atgatggtttcgcgcaacgacgagcgcagaaaaatcaacaagaagcggaagatctccgtt
cgcggcgcccgcggcaacaatctcaaggacattgacgtcgacgtgccgctcagcacgttt
acctgtgtcaccggtgtgtcggggggcggcaagtccacgttcctgatcgatacgctctac
aaggccgcggctcgtcgtctcaatggcgcgcgggacaaccctgccccgcacgatcgcatc
gaaggcctggaagtgctcgacaaggtcatcgacatagatcagtcaccgattggccggacc
cccagatccaaccctgcgacctacaccggtgcctttaccccgatccgtgaatggttcgca
ggaatgcctgaagccaaggccagaggctatcagcccggccggttctccttcaacgtcaag
ggaggccgctgcgaagcctgtcagggcgacggcgtcataaagatcgaaatgcacttcctg
ccggatgtgtacgtcacttgcgacgtatgcaaaggcaaacggtacaatcgggaaacgctc
gaggtcgagttcaagggcaagtcgattgccgacgtgctcgatatgaccgtggatgaagcc
gccgtgttcttctccgcagttcccgccgtgcgcgacaagatggagactctggcgcgtgta
ggtctcggctacatcaaggtcggccaacaggcgaccacgctctcaggtggtgaagcgcag
cgcgtaaagcttgcgaaggaactctccaagcgctcgacgggccgcacgctttacattctg
gacgaacccacgacaggtctgcattttcacgatgtcgcaaagctgctggaagtgcttcac
gaactggttgaccagggcaacacggttctggtgatcgagcacaatcttgaagtcatcaag
acggcagactggattatcgatctgggaccggaaggaggcgacggtggcggcacggtggtt
gcaaccggacggcctgaagacgttgccgaggtttcggaaagctacacgggtcaattcctg
caggaactgctgcagcgacgtccgcaacgggcacacgacgctgcggaataa

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