Ligilactobacillus agilis: BEN83_00570
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Entry
BEN83_00570 CDS
T05198
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
lagl
Ligilactobacillus agilis
Brite
KEGG Orthology (KO) [BR:
lagl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lagl03400
]
BEN83_00570
DNA repair and recombination proteins [BR:
lagl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BEN83_00570
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
DUF7125
AAA_22
nSTAND_NTPase5
ABC_tran
GvpD_P-loop
AAA_16
AAA_14
AAA_24
nSTAND3
AAA_19
SLFN-g3_helicase
ATPase_2
divDNAB
A2L_zn_ribbon
AAA
NTPase_1
DZR
AAA_5
MCM
DUF7129
NACHT
DUF2642
HypA
Motif
Other DBs
NCBI-ProteinID:
ASR40104
UniProt:
A0A226RJJ7
LinkDB
All DBs
Position
110285..111661
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AA seq
458 aa
AA seq
DB search
MAKTKTKYVCQECGYSSPRYLGRCPNCGAWNSLVEEIEEKTSPKAAANARVTISGTKVSP
QLIEQVSIEKTPRIKTNLKELNRVLGGGIVPGSLVLIGGDPGIGKSTLLLQVSGQLADLK
SRVLYVSGEESASQIKMRADRLGVGGSEFYLYPETDMGAVRQSISDLKPDYVIIDSVQTM
QEPEMTSAVGSVAQIREVTADLMQLAKTNGITIFIVGHVTKGGAIAGPKILEHMVDTVLY
FEGDKQRTFRILRAVKNRFGSTNEIGIFEMREGGLYEVANPSEIFLEERLQGATGSAVVA
SLEGTRPILVELQALVTPTAFGNAKRTTTGLDHNRVSLIMAVLEKRAGLLLQNQDAYLKA
AGGVKLDEPAIDLAIAVSLVSSYRDKETRASDCFIGELGLTGEVRTVTRIEQRVAEAAKL
GFKRVIVPKNNLDGWDFPAGIQVLGVTTLNEALHIAFD
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaaaaccaaaacaaagtatgtctgccaggaatgtggttacagctccccacggtat
ttgggccgctgtcctaactgtggagcctggaacagcctggtagaagaaatcgaagaaaag
actagtcccaaggcagctgcgaatgcgcgggtgaccatcagtggtaccaaggttagcccg
caattaatcgagcaagttagcattgaaaaaacaccccgcatcaaaaccaacctaaaagaa
ctaaaccgggtgttaggcggggggattgtccctggctccttggttttgattgggggggat
ccgggaattggtaaatccaccctattattgcaggtttcgggtcaattagctgacttaaag
agtcgggtcttatacgtttctggtgaagaaagtgccagtcaaattaagatgcgggcggac
cggctaggggttggcggtagcgaattttacctctaccccgaaacagatatgggggcggtt
cgtcaaagcatcagtgatttgaaaccagattatgtcattattgactcggttcaaaccatg
caagaaccggaaatgacttcggctgtcggcagcgttgcccaaattagggaagtaaccgcc
gatttgatgcagttagccaagaccaacggcattaccatcttcattgttggccacgtaact
aaggggggcgccattgctgggcccaagatcttagagcacatggttgataccgtcctttat
tttgaaggggataagcaaaggacctttcggattttgcgggccgtcaaaaaccgctttggc
tccaccaatgaaattgggatttttgagatgcgggaagggggcttatatgaggtcgctaac
ccgtcagaaatctttttggaagaacggctgcaaggtgcaaccgggtcggcagtggtggct
tcacttgaaggaacccgcccaattttggttgaactccaagccctggtaaccccaactgcc
tttgggaatgctaagcggaccacgaccgggcttgaccataaccgggtttcattgattatg
gccgttttagaaaagcgggccggcttgttattacaaaatcaggatgcctacctaaaggcc
gcggggggcgttaagctagacgaacctgcgattgacttagcgattgcagttagtttggtg
tcctcttaccgggataaggaaacccgggcgagcgactgctttatcggtgagttaggctta
actggtgaggtccggacggtaacaaggattgaacaacgggtggcagaagccgctaagcta
ggttttaagcgggtaatcgttcctaaaaataacctagacggttgggactttccggctggc
atccaggttttaggggtgacgactttaaacgaagcgctccacattgcctttgactag
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