Ligilactobacillus agilis: BEN83_04120
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Entry
BEN83_04120 CDS
T05198
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lagl
Ligilactobacillus agilis
Brite
KEGG Orthology (KO) [BR:
lagl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lagl03032
]
BEN83_04120
03400 DNA repair and recombination proteins [BR:
lagl03400
]
BEN83_04120
Enzymes [BR:
lagl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BEN83_04120
DNA replication proteins [BR:
lagl03032
]
Prokaryotic type
DNA Topoisomerases
BEN83_04120
DNA repair and recombination proteins [BR:
lagl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BEN83_04120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-C4_Topoisom
Toprim
RNA_POL_M_15KD
DUF2996
Motif
Other DBs
NCBI-ProteinID:
ASR40724
UniProt:
A0A222W3E9
LinkDB
All DBs
Position
complement(808812..810935)
Genome browser
AA seq
707 aa
AA seq
DB search
MPTQSATKATKTKKKTSKRKVKKNLVIVESPSKAKTIGKYLGSRYKVMASVGHIRDLPKS
TMGIDIENNYEPHYISIRGKGPVIKELRKEAKKAAHVYLASDPDREGEAIAWHLSHLLDL
DPQDKNRVAFNEITKETVKNAFKTPRAIDMDKVDAQQARRVLDRLVGYSISPLLWSKVKK
GLSAGRVQSIALNLIIKRQEEIKNFKPEEYWTIDAEFSKDKKQFAASFYGLAGKKKELGN
NDDVKEILAPLDKNQPFTVTAVKKSERLRKPNQPFTTSTMQQTANNVLKFKTSKTMMLAQ
QLYEGISLGKGGAVGLITYMRTDSTRISDQAKHQAASFIHNTYGEEYAALKPQAVKLSEG
AQDAHEAIRPTSVLRTPAELEPYLTKDQLKLYSLIWSRFVASLMTPAVIDTVRVDIEQNG
RTYRANGSQMKFPGFTKVYQESKRKDNLLPALAEGDQVTLVANQPNQHFTLPPAQYTEAS
LIRTLEENGVGRPSTYAPTLSVIQKRYYVKLVARKFEPTELGEIVNHIMEECFPDILNVG
FTAELENDLDSVEEGKRQWVKVIDEFYQPFAKEVSAADEKLAKVKIKDEPAGIDCEICGA
PMVIKLGRFGKFYACSRFPDCRNTKAIIKEIGVTCPQCKEGQVVERKSKKNRTFYGCSRY
PDCDFVSWDKPVGRDCPKCQHYLISKKTKQGMQVKCSNCDYEEAIQK
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgcctactcaaagtgctactaaagcgacaaaaacaaagaagaaaacaagtaaacgtaaa
gtaaagaaaaatttagtgattgtggaatcaccatctaaagctaaaacgattggcaagtac
cttggttcacgttataaggtgatggccagtgtcggtcatattcgggatttacctaagagt
acgatggggattgacattgaaaataactacgaaccccattatatttccattcggggtaag
ggcccggttatcaaggaattacgcaaggaagctaaaaaagcagctcatgtctacttagca
tctgacccggaccgggaaggagaagcgattgcttggcatttatctcacttactggaccta
gatcctcaagacaagaaccgggttgcctttaacgaaattacgaaggaaacggtcaaaaat
gcctttaaaactccgcgggcaatcgatatggataaggttgatgcccaacaagcacggcgg
gtcttagaccggttagtcggttattcaatcagccctttgctatggtctaaggttaaaaaa
ggcttatctgctggccgggttcagtcaattgcgcttaatttgattattaaacgccaagaa
gaaatcaagaactttaagccggaagagtattggacgattgacgccgaatttagtaaggat
aagaagcaatttgcggctagtttttatgggttagcggggaagaaaaaagagttaggaaat
aacgacgacgtaaaagaaatcctcgcgccacttgataaaaaccaaccatttaccgtgacg
gcggttaaaaagagcgaacggttacgcaaacctaaccagccctttacgacgtcaacgatg
caacaaactgccaataacgtcttgaaatttaagacctctaagactatgatgttagctcaa
caactctacgaaggaatcagtctaggcaaggggggcgccgttgggttaatcacttatatg
cggacggactcaacccgtatttccgaccaagctaagcaccaagcagctagcttcattcac
aatacttatggtgaggagtacgcagccttaaaaccccaagcggttaagctcagtgaagga
gcccaggatgcccacgaagcaattcggccaacatctgtactaagaacgccggcagagtta
gaaccttatttaactaaggaccagttaaaactttacagtttgatttggtcaaggtttgtg
gcttccctaatgactccggcagtaatcgatactgtccgcgtcgatattgaacaaaatggc
cggacttaccgggctaatggttcgcagatgaagtttcctggttttaccaaggtttaccaa
gagtctaaacgcaaggataacctcttacccgctttagcagagggtgaccaggtcacacta
gttgctaaccaacctaaccaacactttaccctcccaccagcccagtatacggaagctagt
ttaatccggaccttggaagaaaatggggtgggccggccttcaacttacgccccaacttta
agcgtcattcaaaagcgctattacgttaaattggtggcccgtaaatttgaaccaacggaa
ctaggggaaattgtcaaccacattatggaagagtgcttcccagatattttaaacgttggg
tttacggcggagctagaaaacgacctagatagcgttgaagaaggaaagcggcagtgggtc
aaagtcattgatgaattctaccagccgttcgctaaggaagtcagtgctgctgacgaaaag
ctggctaaggttaaaattaaagacgaacccgccggaattgactgtgaaatctgtggggcc
ccaatggttattaagttaggccgctttggtaaattctatgcctgcagtcgtttccctgat
tgccggaatactaaagccatcatcaaggaaattggggtgacttgtccgcaatgtaaagaa
ggacaggtggtcgaacgaaaatcaaagaaaaaccggactttttatggctgttcccgttac
ccagactgtgactttgtttcctgggataagccggttggccgcgactgtcctaagtgtcaa
cattacctaattagtaagaaaactaagcaggggatgcaagttaaatgtagtaactgtgac
tacgaagaagcaattcaaaaatag
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