Ligilactobacillus agilis: BEN83_05205
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Entry
BEN83_05205 CDS
T05198
Name
(GenBank) hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
lagl
Ligilactobacillus agilis
Pathway
lagl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lagl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BEN83_05205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lagl03019
]
BEN83_05205
Messenger RNA biogenesis [BR:
lagl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BEN83_05205
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_barrel
Motif
Other DBs
NCBI-ProteinID:
ASR40918
LinkDB
All DBs
Position
1019538..1020395
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AA seq
285 aa
AA seq
DB search
MEILSQEHQLTLKSEQLSLSLDPKRPCPGPILISHLYDELFDLLAKLEDQTVYLHLDLLL
YLQKYYRFKGWRLPDLNFVALPLGYPFQLADLTIEAFNNDDNAFGSLVCIISDGQSKLGY
APKFVPHGQHKKRIKLWKKAFSQADLDYFCLSQDLVAATNDFRALTEVGRQKSLTKYLQH
LEADQSGQILLSYEKPERILTMQKTALAAGFNLKLAPAGQAFLQALFPFEEPVSQTEATR
DLIVVSTPSATTFDARASLAIQPVMAPKEAKEFLNVIKAKEVIYL
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggaaattttaagtcaagagcaccaactaacccttaaaagtgagcaacttagcttaagc
ctggaccctaagcgtccttgccccgggcccattttaatcagccacctctatgatgagctt
tttgacttgctagcaaaacttgaggaccaaaccgtctacttgcacttagacctcctctta
tatttgcaaaagtattaccgctttaagggctggcgtttaccggacttaaactttgtcgcc
ctcccgttaggctatccgttccagctagctgacctaacgattgaagcctttaataacgac
gacaatgcctttggctccctggtttgcatcatcagtgacggccaaagtaagctcggctac
gccccaaagtttgtcccccatggtcaacataaaaagcgaatcaagctttggaagaaggcc
tttagccaggcagacctcgattacttttgcctaagccaagacttagttgctgccactaac
gactttcgagccctaactgaagttggccggcaaaagagtctcactaagtacctacagcac
ctagaggccgaccaaagtgggcagattttactgtcctatgaaaaaccagagcgcatcttg
accatgcaaaagacggccttagcagccggctttaatttaaagttagctcctgctggccaa
gcctttttgcaggctctctttccctttgaagagcccgtttcacaaactgaggcaacaagg
gacctcatcgtcgtttcgaccccaagcgcaactacctttgacgcgcgggctagcctggca
atccagccggtaatggcccccaaggaagccaaggaattcctaaacgtcatcaaggctaag
gaagtcatttacctctaa
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