Ligilactobacillus agilis: BEN83_05555
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Entry
BEN83_05555 CDS
T05198
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
lagl
Ligilactobacillus agilis
Pathway
lagl03030
DNA replication
lagl03430
Mismatch repair
lagl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lagl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BEN83_05555
03430 Mismatch repair
BEN83_05555
03440 Homologous recombination
BEN83_05555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lagl03032
]
BEN83_05555
03400 DNA repair and recombination proteins [BR:
lagl03400
]
BEN83_05555
Enzymes [BR:
lagl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BEN83_05555
DNA replication proteins [BR:
lagl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BEN83_05555
DNA repair and recombination proteins [BR:
lagl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BEN83_05555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Lipoprotein_16
Lin1244_N
RNA_lig_T4_1
Motif
Other DBs
NCBI-ProteinID:
ASR40983
UniProt:
A0A222W4Q7
LinkDB
All DBs
Position
complement(1086382..1087404)
Genome browser
AA seq
340 aa
AA seq
DB search
MKVSELEKKLAQGECAPVYLVLGAEEYSINQAKEAFLKLVPKEEREFNVGAYDMETTPLV
EALNDALEIPFFGDKRLVFVKRPLFLTAESKKSKVEHDIDGLMNYLDNPEPTTVLVFLAP
YVKLDERKKVTKKLKKAAVLVDAAPASEGEIRQRLKEELQAKGYTITAEALEELLVRTDA
NLTRIMAELPKLTLLAMETREITVAQVERMVTRSLEQNVFKLVDLVLAKKVQAALGLYHD
LLEQKEEPLKLNAILLGQFRLLIQIQVLAAKGYAQGNIAQVLKAHPYRVKIALRNIRQYR
FALKDLASAYLGLVAVEKKLKSTQQEAELLFQLFMLEYVK
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaagtgaattggaaaaaaagctagctcaaggtgagtgtgcgccggtttaccta
gttttaggtgccgaggaatatagcattaaccaagccaaagaagcttttttaaaattagtt
cctaaagaagagcgggagtttaacgtgggggcctacgacatggagacgacgcccttagtt
gaagctttgaacgacgctttagagattccattttttggcgataagaggttggtttttgtt
aagcgccccttatttttgacggctgagagtaaaaaaagtaaggtagagcatgatatagat
gggctaatgaactatttagataatccggagccaactactgtcttagtatttttagcccct
tatgttaagttagacgaacggaaaaaggttacgaagaaattaaaaaaggccgcggtacta
gttgatgcagcccctgcaagcgagggcgaaattcgccaaaggttaaaagaagaattacaa
gcaaagggatatacaattactgctgaggcacttgaagaattacttgtgcgtacagatgct
aatttgacccggataatggctgaattacccaagttgaccttgttagcaatggaaacaaga
gaaattacggtagcccaagttgagcggatggtaactcgctcactagaacaaaatgttttt
aaactagttgatttagtgctagctaaaaaagttcaggcagccttaggtttataccatgat
ttgctagagcaaaaagaagagccgttaaagttaaatgcgattttgctagggcaatttagg
ttgttgattcaaattcaagtcctcgctgccaaaggttacgcacaaggaaacatcgcgcaa
gtattaaaggcgcacccataccgggtaaagattgccttaagaaacattaggcagtatcgg
tttgctctaaaagatttggccagcgcctatttagggttagttgcagtggaaaagaaactt
aaatcaacccaacaggaagcagagctattgtttcaactgtttatgttggaatatgtaaaa
taa
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