Ligilactobacillus agilis: BEN83_06170
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Entry
BEN83_06170 CDS
T05198
Name
(GenBank) 3'-5' exonuclease
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lagl
Ligilactobacillus agilis
Brite
KEGG Orthology (KO) [BR:
lagl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lagl03019
]
BEN83_06170
Messenger RNA biogenesis [BR:
lagl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BEN83_06170
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
CDC73_C
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
ASR41081
UniProt:
A0A226RHZ7
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All DBs
Position
complement(1192626..1193582)
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AA seq
318 aa
AA seq
DB search
MTKKIFDYELNENLDLFVLIKAAQARLAKNGKQFIAFEFEDKSGEISAKYWDASDEEVKR
YQSGQVVHLSGKRENYQGNPQIKIYKLRLATEQEPNDPSLYVQGAPQSVTEMQAELEKFV
FKIHNSTWNRIVRVLLQKYQAQFFTYPAAKKNHHAFQGGLAYHTLTILKLAQGVSQLYPQ
VDESLLYAGAILHDLGKVIELSGAMSTQYTVAGNLLGHIVLVDEEIIKACQQLGIDTAKE
DAILLRHMILAHHGLLEYGSPVTPHILEAEILHHLDDLDASIQMVETSLSHTSPGEFSER
VFGLEGRSFYQRKQGKLE
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaaaatatttgattatgaattaaatgaaaatctagatttatttgtgctaatt
aaggctgctcaggcgcggctggctaaaaatggcaaacagttcatcgcctttgagtttgaa
gataagtcgggtgaaattagcgcgaagtactgggatgcttcggatgaagaagtcaaacgt
tatcaaagtgggcaagtcgtacatttaagcgggaagcgtgaaaattatcaaggaaatccg
cagattaaaatttataagctcaggttagcgaccgagcaggaacctaatgatccaagctta
tatgttcaaggagcaccccaaagtgttacggagatgcaagcggagcttgaaaaatttgta
tttaagattcataacagtacctggaaccggattgtgcgggtgttattgcagaagtatcaa
gcccagttttttacctacccagcggctaagaaaaatcaccatgcctttcaaggcggccta
gcataccatactctgactatcttgaaactagcacaaggtgtaagtcaactttacccgcaa
gtagatgagtcgttgctttacgctggggcgattttgcatgatttggggaaggtaatcgaa
ttatcgggggcaatgagcacccaatatacggttgccggcaatctattaggtcatatcgta
ctggttgatgaagaaattattaaggcctgtcaacagctaggtattgataccgctaaggaa
gacgccatcttattacggcatatgattctagctcaccatggtttgcttgagtatggctcg
cctgttacaccgcatattttagaggctgaaatcttacaccacctcgacgatttggatgcc
tctattcaaatggtggaaaccagtcttagccacactagcccgggtgaattttcggaacgg
gtttttggtttagaggggcggtccttttaccaaagaaagcaaggaaaattagagtaa
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