Ligilactobacillus agilis: BEN83_06790
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Entry
BEN83_06790 CDS
T05198
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
lagl
Ligilactobacillus agilis
Brite
KEGG Orthology (KO) [BR:
lagl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lagl03016
]
BEN83_06790
Enzymes [BR:
lagl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
BEN83_06790
Transfer RNA biogenesis [BR:
lagl03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
BEN83_06790
Prokaryotic type
BEN83_06790
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Lactamase_B_4
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
ASR41195
LinkDB
All DBs
Position
complement(1323269..1324207)
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AA seq
312 aa
AA seq
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MELEFLGTGAGSPAKFRNVTGIALKLLEERNSIWLFDCGEGTQHQILRTNIRPRKIDKIF
ITHLHGDHVFGLPGFLSSRSFQGGDQMEPLTIYGPRGIKEFVNCALKISQSKLSYKINFV
ELDKEGVLYEDDRFVVSFKYLEHRITSVGYRIVEKDYPGELLVAKLQAANIPSGPLYGQL
KAGQVVTLDDGRIVDGKDYLGPDKKGRIVTILGDTRQTASISELAQDADVLVHESTFGKG
EGKLARSYYHSTSLQAAKVAKNAGVKQLLLTHISARYVGPLVKQLEQEAKSVFANSRVVK
DFDVIEVPFPKS
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggaacttgaatttttaggaacaggggcaggatcgcctgctaaatttcgtaatgttaca
ggcattgcgctaaaattattagaagaacggaactcaatttggttatttgactgtggtgaa
ggaacccagcaccaaatcttacggactaacatccggcctcggaagattgataagattttc
ataacccacttacatggagatcatgtttttgggttgccaggctttttgagtagtcgttct
tttcaaggtggagaccaaatggagccattgacaatctatggtccgcgaggcattaaggaa
tttgttaattgtgctttgaaaatctcacaatctaaattatcttataaaatcaactttgtt
gaacttgacaaagaaggggtattatacgaggacgacaggtttgtcgtttcctttaagtac
ctggaacatcggattactagcgtgggttaccggattgtagaaaaggattacccgggtgaa
ttactggttgctaagttacaagcggcaaatatcccgtctggcccactttacggtcagttg
aaggctggccaggttgtcacccttgatgatggacgaatcgtggatgggaaagattatctt
ggtcctgataaaaaaggtcgaattgtaaccattttaggtgatactagacaaacggcaagt
atcagtgagttagcccaggatgcagacgtattagtacatgagagtacttttggcaagggt
gaaggaaagttagcccgcagttattatcattcaacctctttgcaggcagctaaggtggca
aaaaatgcgggggtaaaacagttactattaacccacatttctgcccggtatgttggccca
cttgttaagcaattagagcaagaagcaaagagcgtttttgctaacagtagagttgtcaag
gatttcgatgtgattgaggtaccgtttcccaaaagttaa
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