Ligilactobacillus agilis: BEN83_10735
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Entry
BEN83_10735 CDS
T05198
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lagl
Ligilactobacillus agilis
Brite
KEGG Orthology (KO) [BR:
lagl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lagl03016
]
BEN83_10735
Enzymes [BR:
lagl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
BEN83_10735
Transfer RNA biogenesis [BR:
lagl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BEN83_10735
Prokaryotic type
BEN83_10735
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
ASR41879
UniProt:
A0A226RKZ2
LinkDB
All DBs
Position
2165602..2166354
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AA seq
250 aa
AA seq
DB search
MTKRYKITMAYDGTNFAGFQIQPNQRTVQGVLEKAINKMSKLDEYITVHGSGRTDAGVHA
LAQVAHFDFPHEISAEGMLRGLNSMLPLDCEITACEIVPDSFHSRFTTHGKRYMYRVSRG
RYTNPFKRFYTGHYKYPLDIDRIKEAMPDVEGTHDFSSFVASGSQVKDHVRTIYEATVRE
DKANDEIIFEFYGNGFLYNQVRIMVATLLEIGNGRRDVHDFLRLYEVKDRSQARETAPAS
GLYLKEVYYD
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagagatataagattacaatggcttacgacggcacgaattttgcggggtttcag
attcaacctaaccagcgtacggttcaaggggtgctcgaaaaggccatcaacaaaatgagt
aagctagatgaatatattacggtccatggctctgggcggacggatgccggcgtgcacgcg
ttagcccaggttgcccactttgattttcctcacgaaatttctgcagaagggatgttgcgg
ggcctaaatagcatgttacctttagactgcgagattacggcctgtgagattgtccctgac
agtttccactcccgctttaccacccacggcaagcgctacatgtaccgggtgagtcggggc
cggtatacgaacccctttaaacgcttctacactggtcattataagtacccactggatata
gaccggattaaggaagcaatgccggatgtcgaagggacccatgacttttctagttttgtg
gcttcgggtagccaggttaaagatcatgttcggaccatttacgaagccacggttagagag
gataaggctaacgacgaaattatctttgaattttatggtaacggctttttatataaccag
gtacggattatggtcgccaccctgttagaaattggtaacggccgccgggatgtccatgat
tttctaagactttatgaggtcaaagaccggtcgcaggcccgtgagacggcgccggccagt
ggcttgtatttaaaagaagtttattacgattaa
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