Lysinibacillus agricola: FJQ98_04275
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Entry
FJQ98_04275 CDS
T07480
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
lagr
Lysinibacillus agricola
Pathway
lagr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lagr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FJQ98_04275 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lagr03400
]
FJQ98_04275 (uvrB)
DNA repair and recombination proteins [BR:
lagr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FJQ98_04275 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FJQ98_04275 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
P-loop_SecA
AAA_16
AAA_7
AAA_22
AAA_30
UB2H
TrwB_AAD_bind
AAA_19
AAA
AAA_25
PMT2_N
COG5_N
Motif
Other DBs
NCBI-ProteinID:
QQP13292
UniProt:
A0ABX7AVJ0
LinkDB
All DBs
Position
898374..900353
Genome browser
AA seq
659 aa
AA seq
DB search
MQAFDLQAPYTPNGDQPQAIAELVEGVCAGKRHQTLLGATGTGKTFTISNVIKQVKKPTL
IMAHNKTLAGQLYSEFKEFFPNNAVEYFVSYYDYFQPEAYVPQTDTYIEKDSSINDEIDK
LRHSATSALFERDDVIIIASVSCIYGLGSPEEYREMVVSVRTGMEIERNQLLRKLVDVQY
ERNDVSFTRGTFRVRGDVVEIFPASRDEHCIRVEFFGDEIDRIREVDALTGEILAERDHI
AIFPASHFVTREEKMRKAIENIEKELEERLALLRAEDRLLEAQRLEQRTRYDLEMMGEMG
FCSGIENYSRHLTLREAGATPYTLLDYFPDDFLLVVDESHVTLPQVRGMYNGDQARKGVL
VEHGFRLPSALDNRPLRFEEYEKHIHQAIYVSATPGPYELEHSPEMVQQIIRPTGLLDPQ
IEVRPIEGQIDDLIDQIQDRIARDERVLVTTLTKKMSEDLSAYLKEMGLKVEYLHSEIKT
LERFEIIRELRKGTYDVLIGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNANGHVIMYADNMTDSMKKAIEETKRRRIMQMAYNEEHGITPKTIVKKIPDVIRATQV
AEEEESYVAKTTKGKKLTKEEREQLLASLEVEMKEAAKALDFERAADLRDTIFELKVEG
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
gtgcaagcatttgatttacaagcgccatatacgcctaatggcgatcagccacaggcaatt
gcggaattagtggagggtgtatgtgcaggtaaacgtcatcaaacattgctcggtgcaaca
ggaacaggaaaaacgtttacgatttctaatgtcattaaacaagtaaaaaaaccgacactt
attatggcgcacaataaaacattagcgggtcaattatatagtgagtttaaagagttcttc
cctaataatgcagttgaatactttgtcagctactatgattactttcagcctgaggcctat
gtaccgcagacggatacttatatcgagaaagactcaagcattaatgatgaaattgataag
ttgcgtcactctgcgacatctgcattattcgagcgtgatgatgtcattattattgcatcc
gtgtcctgtatttatggtctaggttctccagaagaatatcgtgaaatggtcgtgtctgtg
cgtactgggatggaaattgaacgtaatcagttgcttcgaaaactggtcgatgtacagtat
gagcgtaatgatgtgagttttacacgtggtacgtttcgggtacgtggtgatgtagtggaa
atattccctgcatctcgtgatgagcattgtatccgcgtggagttttttggggacgagatc
gaccgaattcgcgaggtggatgcgttaactggagaaatactagcagagcgtgatcatata
gctattttcccagcatcccacttcgttacacgagaagaaaaaatgcgaaaagccattgaa
aatattgaaaaagagttggaggagcgtctagctcttttacgtgcagaggatagattattg
gaggcacagcgtttagagcagcgtactcgttatgatttagaaatgatgggtgaaatgggc
ttttgctcaggtatcgaaaactactcgcgtcatttaacattgcgtgaagcgggggcaact
ccatatacgctacttgattatttccctgatgattttttacttgttgtcgatgaaagtcac
gttactttgccacaagttcgagggatgtataacggtgaccaagcacgtaaaggtgtacta
gttgagcatggcttccgtttgccatcagcactagataaccgccctttacgttttgaagaa
tatgagaaacatatacatcaagctatttatgtatcagcaacacccggcccgtatgagctt
gagcattctccggaaatggtgcagcaaattattcgtccaactgggctgcttgatccacaa
attgaagtacgtcctattgaaggacaaattgatgatttaatcgatcagattcaagatcgt
attgctcgtgatgaacgggtgctcgttacaacattgacgaaaaaaatgtcagaggattta
tcagcttatttgaaagaaatgggcttaaaggtggagtacttgcattcagagattaagacg
ctagagcgatttgaaattattcgcgagctgcgcaaaggtacttatgatgttctaatcggc
attaacttattgcgtgaagggctagatattcctgaggtttctcttgtggcgattttagat
gctgacaaggaaggatttttacgttcagagcgttcattaattcaaacgattggacgtgcg
gcgcgtaatgctaatggtcatgtcattatgtacgcagataatatgacggattcgatgaaa
aaggcgattgaggaaacgaagcgtcgtcgaataatgcaaatggcgtataacgaggagcat
ggcattacgccgaaaacgattgttaagaaaattcctgatgttattcgtgcaacacaggtg
gcagaggaagaagagtcttatgtagcgaagacaacaaaaggtaagaagttaacgaaggaa
gaaagagagcaattacttgcttccctagaagtagaaatgaaggaagcagcaaaggcgcta
gatttcgaacgagctgctgatctgcgcgatacaatatttgaattgaaggtagaagggtga
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