Lysinibacillus agricola: FJQ98_04280
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Entry
FJQ98_04280 CDS
T07480
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
lagr
Lysinibacillus agricola
Pathway
lagr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lagr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FJQ98_04280 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lagr03400
]
FJQ98_04280 (uvrA)
DNA repair and recombination proteins [BR:
lagr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FJQ98_04280 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FJQ98_04280 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_21
AAA_16
AAA_29
RsgA_GTPase
nSTAND1
nSTAND3
AAA_22
DnaJ_CXXCXGXG
AAA_25
APS_kinase
AAA_23
ATPase_2
AAA_18
NACHT
cobW
Viral_helicase1
MMR_HSR1
PRK
NB-ARC
MeaB
Septin
MobB
Motif
Other DBs
NCBI-ProteinID:
QQP13293
LinkDB
All DBs
Position
900361..903225
Genome browser
AA seq
954 aa
AA seq
DB search
MKNTEIVVQGARAHNLKNINVTIPRDQLVVLTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMDKPDVDAIEGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLFARIGKP
ICPNHGIEITSQTIEQMVDRLLFYPERTKMQLLAPMVSGRKGTHVKLLEDLKKQGFVRVR
LDGELRDLDDAIDLDKNKKHSIEVVVDRVVMKEGVASRLSDSLETALRLADGRVLVDVME
HEELLFSEHHACPLCGFSIGELEPRMFSFNSPFGACPSCDGLGSTQEVDLDLVVPDWDRS
LLEHAIAPWEPTSSQYYPQLLKAVCDHYDIPMDVPVKDLPKEKMDKILYGSGKDKIHFHY
ENEFGNVRDQMIEFEGVVRNVERRFKETSSDYVREQMEKYMAQQACPSCKGYRLKPETLA
VKIADKHVGEVTQYSIQEADTFFKELDLSEKDMKIARLVLREIEERLGFLVNVGLDYLTL
SRAAGTLSGGEAQRIRLATQIGSRLTGVLYILDEPSIGLHQRDNDRLISTLQNMRDIGNT
LIVVEHDEDTMLAADYLIDVGPGAGVHGGQIVAAGTPQEVMENDKSLTGQYLSGKKFIPL
PIERRKPNGRKLSIKGAKENNLHNVKVDVPLGLFVAVTGVSGSGKSTLINEILYKSLAQK
LNRSKVKPGEHKEITGIDELEKVIDIDQSPIGRTPRSNPATYTGVFDDIRDVFAVTNEAK
VRGYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCHGKRYNRETLEVKYKD
KSIADILDMTIENAVVFFENIPKIQRKLQTIVDVGLGYMKLGQPATTLSGGEAQRVKLAS
ELHRRSTGKSFYILDEPTTGLHADDIARLLIVLQRLVENGDSVLVIEHNLDVIKTADYII
DLGPEGGDKGGTIVATGTPEEVAEVSGSYTGKYLKPILTRDRMRMEAALAKASQ
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaatactgaaatagtcgtgcagggcgcacgagcacataatttaaaaaatattaat
gtcacaattccacgtgatcaactagtagtgctaacaggtttatcaggctcagggaaatcg
tcattagcgtttgatacgatttatgccgagggacaacgtcgttatgtagaatcactttca
gcctatgcacgtcaatttcttgggcaaatggacaaaccagacgtcgatgcgatagagggg
ttatctcctgctatttcaatcgatcaaaaaacgacgagccgtaacccacgttctactgtt
ggtacagtaacggaaatctatgattatttacgtttgctatttgcgcgtatcggtaagcct
atttgtccgaatcatggtattgagattacctcccaaacgattgagcaaatggtcgatcga
ctattattttatccagaaagaacgaaaatgcagctgcttgccccaatggtatcagggcgt
aagggaacgcacgtaaagctactggaggatttaaaaaagcaaggctttgttcgagtacgt
ctcgacggggagctacgtgatttagatgatgcgattgatcttgataaaaacaaaaagcat
tcaatagaagtagtcgtggatcgtgttgttatgaaggaaggcgtcgcgtcacgtcttagt
gattccttagagacagcattacgtttggcagatggccgtgtacttgtcgacgtgatggag
catgaggaattattatttagtgaacatcatgcctgtccattatgtggattttcaatcggt
gagctagagccccgaatgttttcatttaacagtccattcggagcttgtccaagctgtgat
ggtttaggctcgacgcaagaggtagatcttgatttagtagtacctgattgggatcgaagt
ttattagagcatgctatagcaccatgggaacccactagctctcaatattatccacagtta
ttaaaggcggtatgtgatcattatgatattccgatggatgtacctgtaaaggatcttccg
aaagaaaagatggataaaattttatatggttctggaaaagataaaatccacttccattat
gaaaatgagtttggcaatgttcgagatcaaatgattgaatttgaaggtgttgtacgtaat
gtggagcgccgttttaaggagacatcttctgattacgtgcgtgaacaaatggaaaaatat
atggcacagcaagcgtgtccgtcttgtaaaggttatcgtttaaagcctgaaacattagct
gtaaaaatagcagataagcatgttggtgaagttacacagtattccattcaggaagctgat
acatttttcaaagagctagatttatcagaaaaagatatgaaaattgctcgacttgtctta
cgtgaaattgaagaacgtctaggcttcctcgtaaacgtgggattagattatttaacgtta
agtcgagcggcaggaacactttcagggggagaagctcaacgaattcgccttgcgacacaa
attggctcgcgtttaacaggtgtcctctatattttagatgaaccatcaattggcttgcat
caacgcgataatgaccgtctcattagtacgctgcaaaatatgcgtgatattggcaatacg
cttattgttgtcgagcacgatgaagatacaatgctggcggcggattatctcattgatgtt
ggtcctggtgcaggtgtgcatggtggtcaaattgttgcagcagggacaccgcaggaagta
atggaaaatgataaatctttgacggggcaatatttaagtggtaagaagtttattccactg
ccaattgagcgacgcaaaccgaatggacgcaaattatccattaaaggtgctaaggaaaat
aatcttcacaatgtgaaggtggatgtaccacttggattattcgtggccgtaacaggcgtt
tcagggtcaggtaaatcaacacttattaatgaaattttatataaatcattggctcagaaa
cttaaccgttcaaaggtgaagccgggtgaacataaagaaataacagggattgatgaacta
gaaaaggttattgatattgaccaatcaccaatcggtcgtacacctcgctccaatcctgct
acttatacaggtgtttttgatgatattcgagatgttttcgcagtaacaaatgaggcaaag
gtacgtggctataagaaaggtcgctttagcttcaacgttaagggaggtcgctgtgaggct
tgtcgtggtgacggaattataaaaattgaaatgcatttcctaccagatgtttatgtaccg
tgtgaagtctgccatgggaaacgttataaccgtgaaacgcttgaagtgaaatataaagat
aagagcattgcggatattttagatatgacgattgaaaacgcagtcgtattcttcgaaaat
attccgaaaatccagcgtaagctacaaaccatcgtggatgtaggattaggctatatgaaa
ttaggacaacctgccacaacgttatctggtggtgaggcgcagcgtgtaaaattagcctct
gaattacaccgtcgttcaacaggtaaatcattctatattttagatgagccgacaacgggc
ttacatgcagacgatattgcacgtttactcattgttttacagcgtcttgtagaaaatggc
gattcagtgctagtgatcgaacataatctagatgtcatcaagacagcggactacattatc
gacttagggcctgaaggtggcgacaaaggtggcacaattgttgcgacaggtacacctgaa
gaagtcgcagaagtaagtggctcttatacaggaaaatatttaaaaccgatattaacaaga
gatcgtatgcgtatggaagctgctttagcaaaggcttctcaataa
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